Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
POLE3Q9NRF9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.64□□□□□ -2.31
POLE3Q9NRF9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.64□□□□□ -2.31
POLE3Q9NRF9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.64□□□□□ -2.31
POLE3Q9NRF9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
POLE3Q9NRF9 MIR96-201ENST00000362288 78 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 RNA5SP48-201ENST00000363969 126 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 Y_RNA.361-201ENST00000365515 120 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 AC117470.1-201ENST00000381974 330 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 Y_RNA.404-201ENST00000383978 102 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 RNU6-926P-201ENST00000384075 107 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 Y_RNA.482-201ENST00000384377 111 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 AL031003.1-201ENST00000404229 172 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 MTND3P8-201ENST00000412909 339 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 RNU7-43P-201ENST00000516554 64 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 SNORD45.4-201ENST00000516629 73 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 AC022616.4-201ENST00000522985 181 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 AC080013.6-201ENST00000606185 215 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
POLE3Q9NRF9 RNA5SP432-201ENST00000362480 116 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 RNU6-961P-201ENST00000363893 105 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 Y_RNA.253-201ENST00000364562 112 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 RNU6-99P-201ENST00000364721 107 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 Y_RNA.516-201ENST00000384541 124 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 MIR522-201ENST00000385071 87 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 MRPS18CP6-201ENST00000423587 223 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 MTND4LP26-201ENST00000518144 282 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 AC093027.1-201ENST00000546698 429 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 RNU6-94P-201ENST00000607728 107 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 AL136317.1-201ENST00000612653 226 ntBASIC0.62□□□□□ -2.31
POLE3Q9NRF9 snoU2-30.1-201ENST00000365012 70 ntBASIC0.61□□□□□ -2.31
POLE3Q9NRF9 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.61□□□□□ -2.31
POLE3Q9NRF9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.61□□□□□ -2.31
POLE3Q9NRF9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.61□□□□□ -2.31
POLE3Q9NRF9 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
POLE3Q9NRF9 RNU6-1110P-201ENST00000516462 101 ntBASIC0.61□□□□□ -2.31
POLE3Q9NRF9 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
POLE3Q9NRF9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.61□□□□□ -2.31
POLE3Q9NRF9 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
POLE3Q9NRF9 AC090517.2-201ENST00000614966 680 ntBASIC0.61□□□□□ -2.31
POLE3Q9NRF9 AC027514.1-201ENST00000588561 1603 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 RNU6-324P-201ENST00000363957 106 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 SNORA75.4-201ENST00000391278 119 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 MTND4P28-201ENST00000426217 387 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 HMGN2P32-201ENST00000444648 269 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 SNORD123-201ENST00000459473 70 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 AC117454.1-201ENST00000491120 168 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 RN7SKP164-201ENST00000516138 266 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 AC055872.1-201ENST00000570978 278 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 AC136443.5-201ENST00000603741 370 ntBASIC0.6□□□□□ -2.31
POLE3Q9NRF9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.6□□□□□ -2.31
POLE3Q9NRF9 Y_RNA.88-201ENST00000363029 99 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 SNORA69.1-201ENST00000390904 137 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 RNU6-131P-201ENST00000391144 107 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 SNORD111-201ENST00000408139 94 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 MIR1276-201ENST00000408707 83 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 RNU2-54P-201ENST00000410299 190 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 MTATP6P26-201ENST00000445926 662 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.59□□□□□ -2.31
POLE3Q9NRF9 AC098869.1-201ENST00000481627 292 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.59□□□□□ -2.31
POLE3Q9NRF9 SNORA25.10-201ENST00000515926 124 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 RNU6-718P-201ENST00000516166 105 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 Y_RNA.714-201ENST00000517065 90 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 AC036111.3-201ENST00000526389 112 ntBASIC0.59□□□□□ -2.31
POLE3Q9NRF9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
POLE3Q9NRF9 Y_RNA.339-201ENST00000365325 102 ntBASIC0.58□□□□□ -2.32
POLE3Q9NRF9 MIR625-201ENST00000385047 85 ntBASIC0.58□□□□□ -2.32
POLE3Q9NRF9 AC116353.2-201ENST00000505332 712 ntBASIC0.58□□□□□ -2.32
POLE3Q9NRF9 RNU11-2P-201ENST00000516898 142 ntBASIC0.58□□□□□ -2.32
POLE3Q9NRF9 AF235103.2-201ENST00000525753 346 ntBASIC0.58□□□□□ -2.32
POLE3Q9NRF9 CYP3A137P-201ENST00000562436 69 ntBASIC0.58□□□□□ -2.32
POLE3Q9NRF9 AC011195.1-201ENST00000578177 177 ntBASIC0.58□□□□□ -2.32
POLE3Q9NRF9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
POLE3Q9NRF9 Y_RNA.101-201ENST00000363154 102 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 Y_RNA.172-201ENST00000363765 102 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 RNU6-1215P-201ENST00000384441 102 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 RNU6-1067P-201ENST00000384752 107 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 MIR1277-201ENST00000408536 78 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 MIR548F1-201ENST00000408667 84 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 FCF1P4-201ENST00000448326 183 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 CHEK2P4-201ENST00000450340 246 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 U8.19-201ENST00000459095 133 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 AC133485.1-201ENST00000567176 124 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 AC005176.2-201ENST00000596933 147 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 Z83818.1-201ENST00000603584 150 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 AC005972.2-201ENST00000604690 348 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 AC240442.1-201ENST00000616055 283 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
POLE3Q9NRF9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.57□□□□□ -2.32
POLE3Q9NRF9 SNORD113.3-201ENST00000364630 78 ntBASIC0.56□□□□□ -2.32
POLE3Q9NRF9 MIR520E-201ENST00000384867 87 ntBASIC0.56□□□□□ -2.32
POLE3Q9NRF9 RNU1-119P-201ENST00000391122 165 ntBASIC0.56□□□□□ -2.32
POLE3Q9NRF9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.56□□□□□ -2.32
POLE3Q9NRF9 RNU6-1304P-201ENST00000411374 106 ntBASIC0.56□□□□□ -2.32
POLE3Q9NRF9 AL589823.1-201ENST00000429577 183 ntBASIC0.56□□□□□ -2.32
POLE3Q9NRF9 SNRPGP10-201ENST00000432323 225 ntBASIC0.56□□□□□ -2.32
POLE3Q9NRF9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms