Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AP003484.1-201ENST00000530974 250 ntBASIC0.37□□□□□ -2.35
SND1-IT1Q9HBX3 RNU6-623P-201ENST00000363143 105 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 Y_RNA.453-201ENST00000384223 109 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 Y_RNA.473-201ENST00000384333 102 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 RNU1-119P-201ENST00000391122 165 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 RNU6-131P-201ENST00000391144 107 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 AL392103.1-201ENST00000447000 198 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 CHEK2P4-201ENST00000450340 246 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 AL157398.1-201ENST00000452981 186 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 RNU6-408P-201ENST00000515910 100 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 AF235103.2-201ENST00000525753 346 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 AC004812.1-201ENST00000540773 146 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 Z83818.1-201ENST00000603584 150 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 AC016727.1-205ENST00000605437 569 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 AL359821.1-201ENST00000605519 182 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 AC004467.1-201ENST00000615678 330 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 AC240442.1-201ENST00000616055 283 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 PISRT1.1-201ENST00000616930 107 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 MIR6767-201ENST00000637302 66 ntBASIC0.36□□□□□ -2.35
SND1-IT1Q9HBX3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 SNORD113.3-201ENST00000364630 78 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 SNORA72-201ENST00000384339 132 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 RNU6-613P-201ENST00000410412 108 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 MTND3P8-201ENST00000412909 339 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 AC244098.3-201ENST00000424803 96 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 MTND4P28-201ENST00000426217 387 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 FCF1P4-201ENST00000448326 183 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 MTND3P10-201ENST00000450967 341 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 MIR2053-201ENST00000459295 91 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 RPL7P42-201ENST00000481005 679 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 DEFB108E-201ENST00000524692 240 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 AC093027.1-201ENST00000546698 429 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 AC133485.1-201ENST00000567176 124 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 AC138907.6-201ENST00000568401 126 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 AC087685.1-201ENST00000587507 141 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 RNU6-94P-201ENST00000607728 107 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 AC007742.2-201ENST00000618226 398 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 AC091925.1-201ENST00000623204 462 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 AC008133.2-201ENST00000624540 351 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 MIR4251-201ENST00000635819 61 ntBASIC0.35□□□□□ -2.35
SND1-IT1Q9HBX3 Y_RNA.339-201ENST00000365325 102 ntBASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 SNORD105-201ENST00000386910 85 ntBASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 AC105313.1-201ENST00000509121 353 ntBASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 AC011352.1-201ENST00000512300 793 ntBASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 SNORA25.10-201ENST00000515926 124 ntBASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 MIR2115-201ENST00000516657 100 ntBASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 MIR4524B-201ENST00000581569 115 ntBASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 AC090517.2-201ENST00000614966 680 ntBASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.36
SND1-IT1Q9HBX3 RNU6-961P-201ENST00000363893 105 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 RNY3P4-201ENST00000384428 101 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.577-201ENST00000384794 101 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 RNU6-1304P-201ENST00000411374 106 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 AC005534.2-201ENST00000431047 433 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 AC011195.1-201ENST00000578177 177 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 AC005972.2-201ENST00000604690 348 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 MIR1244-1-201ENST00000612829 85 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 MIR6516-201ENST00000630554 81 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 MIR1244-3-201ENST00000635744 85 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 MIR1244-2-201ENST00000636449 85 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 MIR1244-4-202ENST00000636813 85 ntBASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.72-201ENST00000362894 103 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.88-201ENST00000363029 99 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 SNORD18A-201ENST00000363753 72 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.404-201ENST00000383978 102 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.436-201ENST00000384097 102 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 MIR625-201ENST00000385047 85 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 SNORA69.1-201ENST00000390904 137 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 MIR1277-201ENST00000408536 78 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 MIR1302-7-201ENST00000408841 72 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.592-201ENST00000410274 109 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 MLLT10P1-201ENST00000418346 262 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 SNRPGP10-201ENST00000432323 225 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 RNA5SP458-201ENST00000516188 119 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 AC055872.1-201ENST00000570978 278 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 AC005176.2-201ENST00000596933 147 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 AC104695.3-201ENST00000604052 296 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 RBM11P1-201ENST00000604951 799 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 AC080013.6-201ENST00000606185 215 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 AL355073.2-201ENST00000612106 557 ntBASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.3-201ENST00000362331 103 ntBASIC0.31□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.86-201ENST00000363020 111 ntBASIC0.31□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.101-201ENST00000363154 102 ntBASIC0.31□□□□□ -2.36
SND1-IT1Q9HBX3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.31□□□□□ -2.36
SND1-IT1Q9HBX3 SNORD14E-201ENST00000364009 85 ntBASIC0.31□□□□□ -2.36
SND1-IT1Q9HBX3 SNORD50B-201ENST00000364995 70 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms