Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RNU1-97P-201ENST00000516872 164 ntBASIC2.3□□□□□ -2.04
VPS16Q9H269 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS16Q9H269 AP001485.1-201ENST00000604799 199 ntBASIC2.3□□□□□ -2.04
VPS16Q9H269 MTND1P7-201ENST00000632801 297 ntBASIC2.3□□□□□ -2.04
VPS16Q9H269 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS16Q9H269 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS16Q9H269 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS16Q9H269 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
VPS16Q9H269 MIR340-201ENST00000362125 95 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 RNU1-58P-201ENST00000362413 163 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 Y_RNA.24-201ENST00000362508 103 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 RNU6-899P-201ENST00000363947 107 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 SNORA8.3-201ENST00000384679 139 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 MIR518A2-201ENST00000384966 87 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 RNU6-578P-201ENST00000390980 103 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 RNU6-57P-201ENST00000411348 103 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 AC008134.1-201ENST00000420943 193 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 AL121890.1-201ENST00000435457 205 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS16Q9H269 RNU6-221P-201ENST00000459541 99 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 AC005840.1-201ENST00000498412 377 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS16Q9H269 Y_RNA.797-201ENST00000515977 94 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 RN7SKP164-201ENST00000516138 266 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 RNU6-856P-201ENST00000516959 98 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 MIR4744-201ENST00000581563 82 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 AC002984.1-201ENST00000591692 448 ntBASIC2.29□□□□□ -2.04
VPS16Q9H269 RNU6-23P-201ENST00000363283 107 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 RNA5SP493-201ENST00000364115 91 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 SNORD114-6-201ENST00000364393 72 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 RNA5SP138-201ENST00000365098 114 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 SNORA20B-201ENST00000384220 132 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 SNORD116-13-201ENST00000384408 92 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 Y_RNA.568-201ENST00000384742 113 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS16Q9H269 RNU7-121P-201ENST00000516604 62 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 RNU7-193P-201ENST00000516723 65 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS16Q9H269 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 MIR4435-1-201ENST00000582552 80 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 AC078899.2-201ENST00000595282 212 ntBASIC2.28□□□□□ -2.04
VPS16Q9H269 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS16Q9H269 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
VPS16Q9H269 Y_RNA.215-201ENST00000364204 112 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 U8.7-201ENST00000364940 136 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 Y_RNA.357-201ENST00000365487 109 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 RNU6-969P-201ENST00000383900 105 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 MIR526A2-201ENST00000390198 65 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 RNU6-239P-201ENST00000390990 99 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 RNA5SP465-201ENST00000391195 109 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 SNORA11.4-201ENST00000408823 129 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 EBAG9P1-201ENST00000418955 543 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 AL162725.1-201ENST00000435405 301 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS16Q9H269 RPS27P21-201ENST00000486977 252 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS16Q9H269 SNORA70.12-201ENST00000516084 153 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 RNA5SP272-201ENST00000516095 111 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 RNU6-426P-201ENST00000516464 97 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 RNU6-1337P-201ENST00000516525 95 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 SNORA31.25-201ENST00000517242 134 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 MIR3684-201ENST00000579779 74 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 MIR4431-201ENST00000579990 94 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 Y_RNA.802-201ENST00000614892 130 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 Y_RNA.778-201ENST00000620203 90 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 AL359851.1-201ENST00000569460 4997 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 AL159152.1-201ENST00000635019 2587 ntBASIC2.27□□□□□ -2.05
VPS16Q9H269 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS16Q9H269 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS16Q9H269 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
VPS16Q9H269 SNORD114-7-201ENST00000362520 77 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 RNU6-103P-201ENST00000363686 107 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 RNU6-151P-201ENST00000364158 107 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 RNU4-52P-201ENST00000384209 138 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 Y_RNA.488-201ENST00000384403 102 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 Y_RNA.497-201ENST00000384447 98 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 MIR569-201ENST00000385228 96 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 MT-TT-201ENST00000387460 66 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 RNU11-3P-201ENST00000391111 133 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 MIR873-201ENST00000401120 77 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 BX510359.4-201ENST00000423750 193 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 HMGN2P38-201ENST00000423806 265 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS16Q9H269 AC245047.8-201ENST00000456455 284 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 SNORD65B-201ENST00000459126 73 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 AC117454.1-201ENST00000491120 168 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 AC109810.1-201ENST00000534066 224 ntBASIC2.26□□□□□ -2.05
VPS16Q9H269 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS16Q9H269 SNORA27.1-201ENST00000362604 124 ntBASIC2.25□□□□□ -2.05
VPS16Q9H269 RNU6-1205P-201ENST00000363625 106 ntBASIC2.25□□□□□ -2.05
VPS16Q9H269 RNU6-1240P-201ENST00000365155 104 ntBASIC2.25□□□□□ -2.05
VPS16Q9H269 MIR616-201ENST00000385293 97 ntBASIC2.25□□□□□ -2.05
VPS16Q9H269 RNU2-40P-201ENST00000410833 196 ntBASIC2.25□□□□□ -2.05
VPS16Q9H269 RNU6-383P-201ENST00000410864 94 ntBASIC2.25□□□□□ -2.05
VPS16Q9H269 AL353689.1-201ENST00000438895 199 ntBASIC2.25□□□□□ -2.05
VPS16Q9H269 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS16Q9H269 RNU6-561P-201ENST00000516222 102 ntBASIC2.25□□□□□ -2.05
VPS16Q9H269 RNU6-1146P-201ENST00000516282 102 ntBASIC2.25□□□□□ -2.05
VPS16Q9H269 RNU7-115P-201ENST00000516433 55 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms