Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SNORA25B-201ENST00000365507 128 ntBASIC2.83□□□□□ -1.96
RNF38Q9H0F5 RNU6-1144P-201ENST00000384247 104 ntBASIC2.83□□□□□ -1.96
RNF38Q9H0F5 MIR196B-201ENST00000384852 84 ntBASIC2.83□□□□□ -1.96
RNF38Q9H0F5 MIR181B1-201ENST00000385240 110 ntBASIC2.83□□□□□ -1.96
RNF38Q9H0F5 AP004217.1-201ENST00000480579 346 ntBASIC2.83□□□□□ -1.96
RNF38Q9H0F5 RNU6-1061P-201ENST00000516530 99 ntBASIC2.83□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.712-201ENST00000517011 92 ntBASIC2.83□□□□□ -1.96
RNF38Q9H0F5 PRELID2P1-201ENST00000552837 301 ntBASIC2.83□□□□□ -1.96
RNF38Q9H0F5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF38Q9H0F5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RNF38Q9H0F5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RNF38Q9H0F5 RNU1-22P-201ENST00000363334 158 ntBASIC2.82□□□□□ -1.96
RNF38Q9H0F5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.82□□□□□ -1.96
RNF38Q9H0F5 AC018868.1-201ENST00000491307 315 ntBASIC2.82□□□□□ -1.96
RNF38Q9H0F5 AC097462.1-201ENST00000514125 324 ntBASIC2.82□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.692-201ENST00000516627 105 ntBASIC2.82□□□□□ -1.96
RNF38Q9H0F5 RNU6-667P-201ENST00000517186 102 ntBASIC2.82□□□□□ -1.96
RNF38Q9H0F5 uc_338.4-201ENST00000616635 176 ntBASIC2.82□□□□□ -1.96
RNF38Q9H0F5 AC006435.5-201ENST00000624486 112 ntBASIC2.82□□□□□ -1.96
RNF38Q9H0F5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
RNF38Q9H0F5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
RNF38Q9H0F5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RNF38Q9H0F5 MIR26A1-201ENST00000362205 77 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 RNU6-859P-201ENST00000362728 107 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 RNU6-508P-201ENST00000363231 103 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 RNU2-48P-201ENST00000410694 191 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 RNU2-55P-201ENST00000411146 174 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 AC023449.1-201ENST00000454464 154 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 YWHAEP4-201ENST00000505390 198 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 SNORD33.1-201ENST00000516213 88 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 RNU7-172P-201ENST00000517125 64 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 AC133485.4-201ENST00000561835 220 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 AC138907.4-201ENST00000570107 226 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 MIR4658-201ENST00000584344 65 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 AC108081.1-201ENST00000604358 221 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 MIR3914-2-201ENST00000637339 95 ntBASIC2.81□□□□□ -1.96
RNF38Q9H0F5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.114-201ENST00000363265 113 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 RNU6-1209P-201ENST00000363655 107 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.634-201ENST00000364811 113 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 RNU1-109P-201ENST00000383960 147 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 SNORA40.5-201ENST00000391061 128 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.630-201ENST00000411370 108 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 AC245102.2-201ENST00000448956 180 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 CYCTP-201ENST00000504253 315 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 SNORD77.4-201ENST00000516158 81 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 RNU6-826P-201ENST00000516827 104 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.709-201ENST00000516952 92 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 AC011604.1-201ENST00000545978 196 ntBASIC2.8□□□□□ -1.96
RNF38Q9H0F5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RNF38Q9H0F5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.120-201ENST00000363304 110 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 RNA5SP68-201ENST00000363885 119 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.796-201ENST00000364268 102 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.799-201ENST00000364992 102 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 SNORA22-201ENST00000383907 134 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF38Q9H0F5 AL158147.1-201ENST00000443970 75 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 AL357134.1-201ENST00000445848 426 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 SNORD11-201ENST00000459124 84 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 RPS29P21-201ENST00000496272 170 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 RNU6-991P-201ENST00000516168 107 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF38Q9H0F5 AC131055.1-201ENST00000584626 316 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF38Q9H0F5 MTND5P32-201ENST00000560711 1802 ntBASIC2.79□□□□□ -1.96
RNF38Q9H0F5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNF38Q9H0F5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
RNF38Q9H0F5 MIR592-201ENST00000384959 97 ntBASIC2.78□□□□□ -1.96
RNF38Q9H0F5 MIR1253-201ENST00000408273 105 ntBASIC2.78□□□□□ -1.96
RNF38Q9H0F5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF38Q9H0F5 AC096725.1-201ENST00000514266 313 ntBASIC2.78□□□□□ -1.96
RNF38Q9H0F5 RNA5SP153-201ENST00000516498 76 ntBASIC2.78□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.690-201ENST00000516603 95 ntBASIC2.78□□□□□ -1.96
RNF38Q9H0F5 AL160236.1-201ENST00000556317 195 ntBASIC2.78□□□□□ -1.96
RNF38Q9H0F5 MIR2681-201ENST00000581814 105 ntBASIC2.78□□□□□ -1.96
RNF38Q9H0F5 Pinc.1-201ENST00000616452 154 ntBASIC2.78□□□□□ -1.96
RNF38Q9H0F5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF38Q9H0F5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF38Q9H0F5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF38Q9H0F5 RNU4-82P-201ENST00000362443 140 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 RNA5SP126-201ENST00000365092 109 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 SNORD18B-201ENST00000365659 72 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 HMGN2P35-201ENST00000412164 270 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 HMGN2P34-201ENST00000437647 269 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF38Q9H0F5 SNORA4.4-201ENST00000515921 135 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 RNU7-149P-201ENST00000516739 59 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 RNU2-60P-201ENST00000517290 128 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 CYCSP26-201ENST00000534107 320 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 NDUFA5P6-201ENST00000542110 379 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 MIR3605-201ENST00000583214 100 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 JPX_2.1-201ENST00000614161 69 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 AC009487.4-201ENST00000624969 3585 ntBASIC2.77□□□□□ -1.97
RNF38Q9H0F5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF38Q9H0F5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.77□□□□□ -1.97
RNF38Q9H0F5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms