Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU4-21P-201ENST00000362802 126 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 SNORD113-7-201ENST00000363762 77 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 SNORD49B-201ENST00000365172 72 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 MTND1P26-201ENST00000440488 538 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 HMGN2P32-201ENST00000444648 269 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 snoU13.21-201ENST00000459368 105 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 SNORA40.12-201ENST00000516329 111 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 MTCO2P4-201ENST00000517968 247 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 MIR4804-201ENST00000581683 73 ntBASIC-0.2□□□□□ -2.44
UPF3BQ9BZI7 RNU6-553P-201ENST00000364047 96 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 RNU6-934P-201ENST00000365154 107 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 RNU6-514P-201ENST00000384208 107 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 SNORA8.2-201ENST00000384372 139 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 RNU6-925P-201ENST00000384629 104 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 RNU6-136P-201ENST00000384663 107 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 SNORD100-201ENST00000408573 76 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 SEPT7P4-201ENST00000437076 306 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 RPL30P10-201ENST00000488148 337 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 AL118558.2-201ENST00000556294 238 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 AL354950.2-201ENST00000617939 290 ntBASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.21□□□□□ -2.44
UPF3BQ9BZI7 RNU6-128P-201ENST00000383976 107 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 RNA5SP496-201ENST00000391240 109 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 SNORA75.6-201ENST00000391318 127 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 AL390729.2-201ENST00000416137 156 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 RNU7-56P-201ENST00000458744 62 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 RNU6-232P-201ENST00000517144 64 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 AC026371.1-201ENST00000551867 419 ntBASIC-0.22□□□□□ -2.44
UPF3BQ9BZI7 U8.7-201ENST00000364940 136 ntBASIC-0.23□□□□□ -2.45
UPF3BQ9BZI7 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.23□□□□□ -2.45
UPF3BQ9BZI7 RNU6-38P-201ENST00000384085 107 ntBASIC-0.23□□□□□ -2.45
UPF3BQ9BZI7 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.23□□□□□ -2.45
UPF3BQ9BZI7 MIR224-201ENST00000384889 81 ntBASIC-0.23□□□□□ -2.45
UPF3BQ9BZI7 SNORD57-201ENST00000448188 72 ntBASIC-0.23□□□□□ -2.45
UPF3BQ9BZI7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.23□□□□□ -2.45
UPF3BQ9BZI7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.23□□□□□ -2.45
UPF3BQ9BZI7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.23□□□□□ -2.45
UPF3BQ9BZI7 SNORD45.3-201ENST00000363836 72 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 RNU6-281P-201ENST00000384212 103 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 AL353997.1-201ENST00000432936 108 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 U8.19-201ENST00000459095 133 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 U8.22-201ENST00000459141 133 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 MIR8064-201ENST00000612863 90 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 U6.115-201ENST00000636045 103 ntBASIC-0.24□□□□□ -2.45
UPF3BQ9BZI7 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 RNU6-929P-201ENST00000384429 107 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 RNY3P10-201ENST00000384764 102 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 AC015818.7-201ENST00000428754 109 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 AL358934.1-201ENST00000432346 324 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 AC087499.7-201ENST00000441958 109 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 SCARNA8-201ENST00000515924 131 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 RN7SKP287-201ENST00000516546 266 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 SNORD45.4-201ENST00000516629 73 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 MIR4771-2-201ENST00000577758 74 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 MIR5696-201ENST00000578474 85 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 MIR548AR-201ENST00000582191 57 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 MIR4771-1-201ENST00000582617 74 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 MIR4676-201ENST00000583078 72 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 MIR1295B-201ENST00000636144 60 ntBASIC-0.25□□□□□ -2.45
UPF3BQ9BZI7 RNU6-756P-201ENST00000383997 107 ntBASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 MIR522-201ENST00000385071 87 ntBASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 SNORD28B-201ENST00000390993 75 ntBASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 RNU2-59P-201ENST00000410482 191 ntBASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 AC073464.1-201ENST00000429823 534 ntBASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 RNU6-63P-201ENST00000516690 95 ntBASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 MIR4743-201ENST00000584576 69 ntBASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 AF246928.1-201ENST00000623768 87 ntBASIC-0.26□□□□□ -2.45
UPF3BQ9BZI7 RNU6-790P-201ENST00000384479 105 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 AL354751.2-201ENST00000415471 210 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 RNU7-187P-201ENST00000458985 68 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 RNU7-175P-201ENST00000515915 61 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 RNA5SP268-201ENST00000516828 124 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 AC022616.4-201ENST00000522985 181 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 AC020891.4-201ENST00000605745 93 ntBASIC-0.27□□□□□ -2.45
UPF3BQ9BZI7 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.28□□□□□ -2.45
UPF3BQ9BZI7 RNA5SP128-201ENST00000365305 116 ntBASIC-0.28□□□□□ -2.45
UPF3BQ9BZI7 RNU2-54P-201ENST00000410299 190 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms