Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU2-56P-201ENST00000516826 190 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 AC078899.2-201ENST00000595282 212 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 AC072026.1-201ENST00000605023 201 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 RNU2-4P-201ENST00000606190 192 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 FTX_2.1-201ENST00000618816 94 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 RNU6-112P-201ENST00000363599 104 ntBASIC2.64□□□□□ -1.99
TRIM55Q9BYV6 Y_RNA.233-201ENST00000364407 101 ntBASIC2.64□□□□□ -1.99
TRIM55Q9BYV6 Y_RNA.238-201ENST00000364441 102 ntBASIC2.64□□□□□ -1.99
TRIM55Q9BYV6 MIR196B-201ENST00000384852 84 ntBASIC2.64□□□□□ -1.99
TRIM55Q9BYV6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.64□□□□□ -1.99
TRIM55Q9BYV6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.64□□□□□ -1.99
TRIM55Q9BYV6 MIR4435-1-201ENST00000582552 80 ntBASIC2.64□□□□□ -1.99
TRIM55Q9BYV6 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
TRIM55Q9BYV6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM55Q9BYV6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 RNU1-112P-201ENST00000364401 164 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 Y_RNA.253-201ENST00000364562 112 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 SNORA16B-201ENST00000364674 135 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 RNU6-1062P-201ENST00000383908 107 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 MIR520A-201ENST00000384862 85 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 AC245047.8-201ENST00000456455 284 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 SCARNA8-201ENST00000515924 131 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 MIR4446-201ENST00000578505 67 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 MIR2681-201ENST00000581814 105 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 MIR5092-201ENST00000583139 88 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 MIR4635-201ENST00000583759 79 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 MIR6715A-201ENST00000615929 79 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 CTSLP2-204ENST00000629029 392 ntBASIC2.63□□□□□ -1.99
TRIM55Q9BYV6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RNU6-774P-201ENST00000363238 107 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 Y_RNA.121-201ENST00000363309 113 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RNU6-682P-201ENST00000363843 106 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RNU6-296P-201ENST00000384608 107 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 MIR616-201ENST00000385293 97 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 AL512604.1-201ENST00000404812 257 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RN7SKP51-201ENST00000410781 304 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RN7SKP101-201ENST00000411376 320 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RPS12P2-201ENST00000439728 269 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 AL049830.1-201ENST00000468034 425 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 AC074198.2-201ENST00000508153 258 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RNU6-861P-201ENST00000516745 106 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RNU6-453P-201ENST00000516819 85 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RNA5SP437-201ENST00000517249 129 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 AC091544.4-201ENST00000555268 342 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 RPL23AP91-201ENST00000569211 455 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 AL021707.8-201ENST00000609428 183 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 MIR8054-201ENST00000620877 86 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
TRIM55Q9BYV6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 RNU6-1209P-201ENST00000363655 107 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 RNU6-103P-201ENST00000363686 107 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 RNA5SP496-201ENST00000391240 109 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 RNA5SP100-201ENST00000410903 110 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 RNA5SP59-201ENST00000410922 110 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 AC011753.1-201ENST00000451001 220 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 HMGN1P7-201ENST00000491722 313 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 RNU6-1007P-201ENST00000516586 107 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 RNA5SP402-201ENST00000517148 110 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 AC104984.5-201ENST00000586878 94 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 AL391903.3-201ENST00000612158 163 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 JPX_2.1-201ENST00000614161 69 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM55Q9BYV6 RNU1-138P-201ENST00000384093 164 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 Y_RNA.555-201ENST00000384673 110 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 MT-TT-201ENST00000387460 66 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 RNU6-440P-201ENST00000390882 105 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 MIR1261-201ENST00000408659 82 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 RNA5SP508-201ENST00000411327 119 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 RPL23AP63-201ENST00000498752 471 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 RNU6-1219P-201ENST00000516143 112 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 SNORA31.10-201ENST00000516482 106 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 AL591926.4-201ENST00000616895 298 ntBASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
TRIM55Q9BYV6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 AC131280.1-202ENST00000624067 4211 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms