Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 AP003716.2-201ENST00000528260 108 ntBASIC0.7□□□□□ -2.3
GABARAPL3Q9BY60 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.7□□□□□ -2.3
GABARAPL3Q9BY60 MIR4659A-201ENST00000580269 81 ntBASIC0.7□□□□□ -2.3
GABARAPL3Q9BY60 MIR6857-201ENST00000613267 93 ntBASIC0.7□□□□□ -2.3
GABARAPL3Q9BY60 AC011476.5-201ENST00000615594 130 ntBASIC0.7□□□□□ -2.3
GABARAPL3Q9BY60 U2.1-201ENST00000618978 145 ntBASIC0.7□□□□□ -2.3
GABARAPL3Q9BY60 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 Y_RNA.146-201ENST00000363549 102 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 Y_RNA.230-201ENST00000364348 109 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 MIR764-201ENST00000390811 85 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 Y_RNA.605-201ENST00000410577 105 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 RNU7-90P-201ENST00000459216 62 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 PRDX4P1-201ENST00000507189 574 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 RNU6-155P-201ENST00000516347 100 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 AC136932.1-201ENST00000574771 208 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 AC005972.2-201ENST00000604690 348 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 RBM11P1-201ENST00000604951 799 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 AC022441.3-201ENST00000605737 136 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 AL355073.2-201ENST00000612106 557 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 AC025253.1-201ENST00000613623 543 ntBASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
GABARAPL3Q9BY60 Y_RNA.27-201ENST00000362540 103 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 RNU6-490P-201ENST00000362985 107 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 RNU6-708P-201ENST00000384217 107 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 AC138393.2-201ENST00000414742 246 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 AC098614.3-201ENST00000438957 440 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 AC099799.1-201ENST00000439809 192 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 RPS20P10-201ENST00000451209 253 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 SNORA74.3-201ENST00000517108 154 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 AC090142.3-201ENST00000519012 385 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 U6.92-201ENST00000636464 89 ntBASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
GABARAPL3Q9BY60 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 AL391987.6-201ENST00000305671 199 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 RNA5SP264-201ENST00000363115 107 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 RNU6-324P-201ENST00000363957 106 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 Y_RNA.314-201ENST00000365114 102 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 RNU6-53P-201ENST00000365367 106 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 RNU6-1297P-201ENST00000384415 104 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 SNORD116-29-201ENST00000384516 83 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 RBMX2P4-201ENST00000441256 376 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 RNU6-277P-201ENST00000516272 106 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 RNU6-197P-201ENST00000516680 100 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 MIR4698-201ENST00000577795 80 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 MIR4423-201ENST00000580922 80 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 AC133104.2-201ENST00000615272 193 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 AL442644.1-201ENST00000454390 3105 ntBASIC0.67□□□□□ -2.3
GABARAPL3Q9BY60 SNORA72-201ENST00000384339 132 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 Y_RNA.570-201ENST00000384750 101 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 MIR516B2-201ENST00000385190 85 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 MIR136-201ENST00000385207 82 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 MIR628-201ENST00000385229 95 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 MIR942-201ENST00000401111 86 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 MCFD2P1-201ENST00000417812 300 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 AC096644.2-201ENST00000429278 159 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 U8.19-201ENST00000459095 133 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 COX6CP14-201ENST00000469580 174 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 HMGN1P7-201ENST00000491722 313 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 AC005840.1-201ENST00000498412 377 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 RNU7-41P-201ENST00000515917 61 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 SNORD45.4-201ENST00000516629 73 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 RNU6-699P-201ENST00000517081 110 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 AC211469.2-201ENST00000605461 205 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 MTND4LP32-201ENST00000636111 270 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 AC099654.14-201ENST00000638599 341 ntBASIC0.66□□□□□ -2.3
GABARAPL3Q9BY60 AC068700.1-201ENST00000565862 3754 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 Y_RNA.329-201ENST00000365209 107 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 Y_RNA.387-201ENST00000383918 102 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 RNU6-1040P-201ENST00000383974 107 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 RNY4P36-201ENST00000391116 96 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 MIR1185-1-201ENST00000408598 86 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 MIR1261-201ENST00000408659 82 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 RN7SKP295-201ENST00000517264 153 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 MIR3973-201ENST00000579824 107 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 MIR4781-201ENST00000585250 76 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 VN1R91P-201ENST00000594377 169 ntBASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.65□□□□□ -2.31
GABARAPL3Q9BY60 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
GABARAPL3Q9BY60 SNORD50B-201ENST00000364995 70 ntBASIC0.64□□□□□ -2.31
GABARAPL3Q9BY60 snoU2-30.1-201ENST00000365012 70 ntBASIC0.64□□□□□ -2.31
GABARAPL3Q9BY60 RNU6-1175P-201ENST00000365200 107 ntBASIC0.64□□□□□ -2.31
GABARAPL3Q9BY60 Y_RNA.390-201ENST00000383932 102 ntBASIC0.64□□□□□ -2.31
GABARAPL3Q9BY60 RNU6-1323P-201ENST00000384025 107 ntBASIC0.64□□□□□ -2.31
GABARAPL3Q9BY60 MIR520C-201ENST00000385005 87 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms