Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.39□□□□□ -2.19
CHMP4AQ9BY43 SNORD111.1-201ENST00000516421 86 ntBASIC1.39□□□□□ -2.19
CHMP4AQ9BY43 AC005176.2-201ENST00000596933 147 ntBASIC1.39□□□□□ -2.19
CHMP4AQ9BY43 U2.1-201ENST00000618978 145 ntBASIC1.39□□□□□ -2.19
CHMP4AQ9BY43 MIR1302-1-201ENST00000637932 143 ntBASIC1.39□□□□□ -2.19
CHMP4AQ9BY43 RNU6-324P-201ENST00000363957 106 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 RNU4-41P-201ENST00000364426 143 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 AC002429.1-201ENST00000437672 148 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 AC104332.1-201ENST00000440471 797 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 RPEP5-201ENST00000441137 268 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 RNU7-90P-201ENST00000459216 62 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 PDCD5P2-201ENST00000507570 312 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 RNU6-1337P-201ENST00000516525 95 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 AC025253.1-201ENST00000613623 543 ntBASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CHMP4AQ9BY43 Y_RNA.101-201ENST00000363154 102 ntBASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 RNU6-20P-201ENST00000384106 107 ntBASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 RNY3P4-201ENST00000384428 101 ntBASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 AL031003.1-201ENST00000404229 172 ntBASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 AL354751.2-201ENST00000415471 210 ntBASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 RNU6-1116P-201ENST00000517269 99 ntBASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 AL117336.2-201ENST00000602435 335 ntBASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 AC120024.3-201ENST00000603167 156 ntBASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CHMP4AQ9BY43 MIRLET7C-201ENST00000362160 84 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 RNU6-490P-201ENST00000362985 107 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 SNORD68-201ENST00000363214 84 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 RNU6-626P-201ENST00000363354 107 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 Y_RNA.361-201ENST00000365515 120 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 RNU6-1080P-201ENST00000383982 107 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 RNY4P36-201ENST00000391116 96 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 AC099799.1-201ENST00000439809 192 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 Z98949.2-201ENST00000440996 144 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 AC245047.8-201ENST00000456455 284 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 COX6CP14-201ENST00000469580 174 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 RNU6-155P-201ENST00000516347 100 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 RNU6-699P-201ENST00000517081 110 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 MIR4659A-201ENST00000580269 81 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 UBE2V2P2-201ENST00000587677 504 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 MIR8070-201ENST00000616510 88 ntBASIC1.36□□□□□ -2.19
CHMP4AQ9BY43 SNORA25.9-201ENST00000365087 128 ntBASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 MIR559-201ENST00000385188 96 ntBASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 RNU2-54P-201ENST00000410299 190 ntBASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 FABP5P4-201ENST00000437203 171 ntBASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 RPL39P28-201ENST00000465655 155 ntBASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 RNU6-277P-201ENST00000516272 106 ntBASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 MIR6504-201ENST00000613520 61 ntBASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 AC084781.2-201ENST00000615568 161 ntBASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 AC240442.1-201ENST00000616055 283 ntBASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CHMP4AQ9BY43 SNORA72.1-201ENST00000363485 129 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 Y_RNA.238-201ENST00000364441 102 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 U8.5-201ENST00000364528 136 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 RNU6-1283P-201ENST00000365314 105 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 RNU6-708P-201ENST00000384217 107 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 RNU6-163P-201ENST00000384396 106 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 SNORD116-29-201ENST00000384516 83 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 MIR1276-201ENST00000408707 83 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 AL162725.1-201ENST00000435405 301 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 RPS4XP11-201ENST00000446897 772 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 RNU6-1012P-201ENST00000516606 109 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 AC211469.2-201ENST00000605461 205 ntBASIC1.34□□□□□ -2.19
CHMP4AQ9BY43 MIR1285-1-201ENST00000408593 84 ntBASIC1.33□□□□□ -2.2
CHMP4AQ9BY43 PIGPP3-201ENST00000425307 415 ntBASIC1.33□□□□□ -2.2
CHMP4AQ9BY43 RNA5SP102-201ENST00000516865 106 ntBASIC1.33□□□□□ -2.2
CHMP4AQ9BY43 Y_RNA.718-201ENST00000517110 102 ntBASIC1.33□□□□□ -2.2
CHMP4AQ9BY43 AC006600.1-201ENST00000572529 153 ntBASIC1.33□□□□□ -2.2
CHMP4AQ9BY43 MIR4653-201ENST00000585107 83 ntBASIC1.33□□□□□ -2.2
CHMP4AQ9BY43 MIR6857-201ENST00000613267 93 ntBASIC1.33□□□□□ -2.2
CHMP4AQ9BY43 Y_RNA.336-201ENST00000365307 109 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 RNU6-1040P-201ENST00000383974 107 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 SNORD116-13-201ENST00000384408 92 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 MIR499A-201ENST00000384903 122 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 RNU7-21P-201ENST00000459430 62 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 FAM106DP-201ENST00000586416 501 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 AL020996.3-201ENST00000606617 222 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 AL132765.2-201ENST00000610812 351 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 AL391903.3-201ENST00000612158 163 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 U6.92-201ENST00000636464 89 ntBASIC1.32□□□□□ -2.2
CHMP4AQ9BY43 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 Y_RNA.428-201ENST00000384078 102 ntBASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 Y_RNA.446-201ENST00000384178 104 ntBASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 Y_RNA.714-201ENST00000517065 90 ntBASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 AL355375.2-201ENST00000574825 175 ntBASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 MIR4762-201ENST00000585261 75 ntBASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 SNORD114-21-201ENST00000606412 72 ntBASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 AC138305.3-201ENST00000624988 240 ntBASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CHMP4AQ9BY43 Y_RNA.27-201ENST00000362540 103 ntBASIC1.3□□□□□ -2.2
CHMP4AQ9BY43 RNA5SP247-201ENST00000411181 105 ntBASIC1.3□□□□□ -2.2
CHMP4AQ9BY43 MTCO2P27-201ENST00000420740 428 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms