Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 FCF1P9-201ENST00000412546 282 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 RNA5SP169-201ENST00000517268 117 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 AC105029.1-201ENST00000520250 669 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 MIR378D2-201ENST00000580636 98 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 AC134878.1-201ENST00000619901 243 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 RNU6-433P-201ENST00000363216 104 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 MTCO2P3-201ENST00000442543 421 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 MTCO2P6-201ENST00000463134 685 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 RNU6-334P-201ENST00000517072 102 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 MTND4P33-201ENST00000556706 766 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 MIR4639-201ENST00000584938 69 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 BNIP3P39-201ENST00000601077 554 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 MIR6507-201ENST00000613630 70 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 AC022960.3-201ENST00000619794 441 ntBASIC-1.26□□□□□ -2.61
SCAPERQ9BY12 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.27□□□□□ -2.61
SCAPERQ9BY12 SNORA20B-201ENST00000384220 132 ntBASIC-1.27□□□□□ -2.61
SCAPERQ9BY12 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.27□□□□□ -2.61
SCAPERQ9BY12 AC010486.3-201ENST00000511602 785 ntBASIC-1.27□□□□□ -2.61
SCAPERQ9BY12 RNA5SP461-201ENST00000516451 104 ntBASIC-1.27□□□□□ -2.61
SCAPERQ9BY12 MTATP6P15-201ENST00000527233 835 ntBASIC-1.27□□□□□ -2.61
SCAPERQ9BY12 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.27□□□□□ -2.61
SCAPERQ9BY12 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.28□□□□□ -2.61
SCAPERQ9BY12 MTND1P14-201ENST00000427400 950 ntBASIC-1.28□□□□□ -2.61
SCAPERQ9BY12 RPL22P17-201ENST00000438729 315 ntBASIC-1.28□□□□□ -2.61
SCAPERQ9BY12 HMGN2P32-201ENST00000444648 269 ntBASIC-1.28□□□□□ -2.61
SCAPERQ9BY12 RNU6-612P-201ENST00000516909 102 ntBASIC-1.28□□□□□ -2.61
SCAPERQ9BY12 FGF7P1-201ENST00000582820 288 ntBASIC-1.28□□□□□ -2.61
SCAPERQ9BY12 AC022418.1-201ENST00000624118 445 ntBASIC-1.28□□□□□ -2.61
SCAPERQ9BY12 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 RNU6-407P-201ENST00000365280 104 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 RNU6-550P-201ENST00000391057 101 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 AC018865.2-201ENST00000423631 129 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 RNA5SP66-201ENST00000517178 101 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 MIR3115-201ENST00000577915 68 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 RMST_3.1-201ENST00000611651 109 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 AC009159.2-201ENST00000617603 606 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 AC244669.1-204ENST00000621564 178 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 AC013437.2-201ENST00000639587 677 ntBASIC-1.29□□□□□ -2.62
SCAPERQ9BY12 RNU4-1-201ENST00000363925 141 ntBASIC-1.3□□□□□ -2.62
SCAPERQ9BY12 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.3□□□□□ -2.62
SCAPERQ9BY12 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.3□□□□□ -2.62
SCAPERQ9BY12 AC091959.1-201ENST00000495857 238 ntBASIC-1.3□□□□□ -2.62
SCAPERQ9BY12 SNORA31.14-201ENST00000516728 116 ntBASIC-1.3□□□□□ -2.62
SCAPERQ9BY12 AC127459.3-201ENST00000624328 466 ntBASIC-1.3□□□□□ -2.62
SCAPERQ9BY12 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.3□□□□□ -2.62
SCAPERQ9BY12 SNORD114-25-201ENST00000363742 72 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 AL137792.2-201ENST00000443484 235 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 AF186996.7-201ENST00000492781 209 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 AC010587.1-201ENST00000505809 469 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 AC105081.1-201ENST00000617727 106 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 MIR6740-201ENST00000618268 113 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 AC006386.1-201ENST00000619436 415 ntBASIC-1.31□□□□□ -2.62
SCAPERQ9BY12 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 MIR876-201ENST00000401147 81 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 SNORA25.14-201ENST00000516481 132 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 RNU6-881P-201ENST00000516813 102 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 AC069113.1-201ENST00000517763 267 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 AC022784.5-201ENST00000522241 437 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 AC002044.1-201ENST00000606707 158 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 MIR4791-201ENST00000607666 84 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 SNORA27.1-201ENST00000362604 124 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 MIR522-201ENST00000385071 87 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 SNORA75.4-201ENST00000391278 119 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 MTATP6P26-201ENST00000445926 662 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 AL138752.1-201ENST00000452964 351 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 RNU6-274P-201ENST00000459566 107 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 MIR3684-201ENST00000579779 74 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 SNORA70.25-201ENST00000612741 95 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 AC010205.1-201ENST00000616668 449 ntBASIC-1.32□□□□□ -2.62
SCAPERQ9BY12 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 RNY4P6-201ENST00000363667 96 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 RNU6-117P-201ENST00000365415 107 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 RNU6-434P-201ENST00000384376 107 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 RNU6-393P-201ENST00000384475 107 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 RNU6-136P-201ENST00000384663 107 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 MIR518F-201ENST00000384973 87 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 MIR487A-201ENST00000385009 80 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms