Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNU6-1054P-201ENST00000411293 104 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 MCFD2P1-201ENST00000417812 300 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 snoU13.25-201ENST00000458945 104 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.639-201ENST00000458981 102 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 RPS23P4-201ENST00000487908 423 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 SNORA70.12-201ENST00000516084 153 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 RN7SKP295-201ENST00000517264 153 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 C8orf59P2-201ENST00000603441 271 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 AC006380.1-201ENST00000603598 186 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 AL121655.1-201ENST00000605811 308 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 PART1_1.1-201ENST00000611761 217 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 AL591926.4-201ENST00000616895 298 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 AC068647.2-201ENST00000637380 353 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.310-201ENST00000365063 113 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.329-201ENST00000365209 107 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 SNORA2.2-201ENST00000365473 135 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 RNU6-1080P-201ENST00000383982 107 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 AC108667.1-201ENST00000428618 249 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 AL160004.2-201ENST00000432935 350 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 RPS29P28-201ENST00000446439 141 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 RPS20P10-201ENST00000451209 253 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 RNU6-475P-201ENST00000516073 104 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 SNORD116-28-201ENST00000516123 91 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 RNU6-922P-201ENST00000516753 99 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 RN7SKP88-201ENST00000516847 250 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 AP001094.1-201ENST00000579805 193 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 GHRLOS.1-201ENST00000610995 70 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 7SK.8-201ENST00000612110 250 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.804-201ENST00000615262 101 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 7SK.11-201ENST00000615477 250 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 7SK.13-201ENST00000622040 250 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 AC027335.2-201ENST00000624030 375 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 AC027279.3-201ENST00000625055 122 ntBASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
HDHD3Q9BSH5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.363-201ENST00000365529 113 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 SNORD63-201ENST00000384262 68 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 MT-TD-201ENST00000387419 68 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 MIR1302-11-201ENST00000408051 138 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 MIR1302-9-201ENST00000408365 138 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 MIR1302-10-201ENST00000408734 138 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 MRPL35P3-201ENST00000421557 364 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 MTND1P14-201ENST00000427400 950 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 AC005042.3-201ENST00000453230 174 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 AC233266.1-201ENST00000454518 96 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 OR2A41P-201ENST00000473586 105 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 RNU7-12P-201ENST00000516030 62 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 AC011604.1-201ENST00000545978 196 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 MIR1302-2-201ENST00000607096 138 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 AC242852.1-201ENST00000612151 96 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 AC007485.1-201ENST00000616755 206 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 AC244015.1-201ENST00000622301 99 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 AL008636.1-201ENST00000625038 1018 ntBASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.39-201ENST00000362620 98 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 SNORA25.8-201ENST00000364831 128 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.368-201ENST00000365547 113 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.419-201ENST00000384041 102 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 MIR522-201ENST00000385071 87 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.645-201ENST00000391229 102 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 PMCHL1-202ENST00000423102 261 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 MTND4P19-201ENST00000446659 478 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 AC005972.2-201ENST00000604690 348 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 AL138825.1-201ENST00000618587 192 ntBASIC0.86□□□□□ -2.27
HDHD3Q9BSH5 MTND4P29-201ENST00000503122 1372 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.31-201ENST00000362574 102 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 RNU1-124P-201ENST00000363861 145 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.253-201ENST00000364562 112 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 SNORA22-201ENST00000383907 134 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 RNU6-1323P-201ENST00000384025 107 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 SNORA22C-201ENST00000384614 134 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.551-201ENST00000384661 102 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 AP1B1P2-201ENST00000416196 106 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 HMGN1P10-201ENST00000474557 553 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 RPS26P48-201ENST00000491713 339 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 CYCTP-201ENST00000504253 315 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 RNA5SP404-201ENST00000517118 132 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 AC136932.1-201ENST00000574771 208 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 AC120024.3-201ENST00000603167 156 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 MIR8065-201ENST00000620577 100 ntBASIC0.85□□□□□ -2.27
HDHD3Q9BSH5 AC117470.1-201ENST00000381974 330 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.394-201ENST00000383942 103 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 SNORA72-201ENST00000384339 132 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AL590004.1-201ENST00000405321 300 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms