Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SNORA40.14-201ENST00000516543 86 ntBASIC1.17□□□□□ -2.22
SSX3Q99909 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.17□□□□□ -2.22
SSX3Q99909 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.17□□□□□ -2.22
SSX3Q99909 LARP7P1-201ENST00000605576 316 ntBASIC1.17□□□□□ -2.22
SSX3Q99909 AC006157.1-201ENST00000611750 366 ntBASIC1.17□□□□□ -2.22
SSX3Q99909 AC010205.1-201ENST00000616668 449 ntBASIC1.17□□□□□ -2.22
SSX3Q99909 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
SSX3Q99909 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SSX3Q99909 SNORA7.1-201ENST00000363750 139 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 RNU6-1080P-201ENST00000383982 107 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 Y_RNA.526-201ENST00000384572 110 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 Y_RNA.570-201ENST00000384750 101 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 MIR758-201ENST00000390227 88 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 AC022028.1-201ENST00000412054 408 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.16□□□□□ -2.22
SSX3Q99909 AC093850.1-201ENST00000454121 251 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 RNU6-322P-201ENST00000516010 103 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.16□□□□□ -2.22
SSX3Q99909 AL121655.1-201ENST00000605811 308 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 AL133255.1-201ENST00000606374 441 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 SNORD58B-201ENST00000607313 66 ntBASIC1.16□□□□□ -2.22
SSX3Q99909 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.16□□□□□ -2.22
SSX3Q99909 U8.1-201ENST00000362843 134 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 Y_RNA.80-201ENST00000362996 102 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 SNORD68-201ENST00000363214 84 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 Y_RNA.329-201ENST00000365209 107 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 Y_RNA.458-201ENST00000384240 102 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 Y_RNA.485-201ENST00000384395 102 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 RNU6-1105P-201ENST00000384774 107 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 MIR653-201ENST00000385279 96 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 AL451046.2-201ENST00000403074 277 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 AL390729.2-201ENST00000416137 156 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 MTND1P14-201ENST00000427400 950 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 RNU6-1170P-201ENST00000515974 106 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 AC011604.1-201ENST00000545978 196 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 AC090049.2-201ENST00000550377 109 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 MIR4421-201ENST00000578133 69 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 GHRLOS.1-201ENST00000610995 70 ntBASIC1.15□□□□□ -2.23
SSX3Q99909 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SSX3Q99909 AL391987.6-201ENST00000305671 199 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 MIRLET7C-201ENST00000362160 84 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 Y_RNA.172-201ENST00000363765 102 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 Y_RNA.331-201ENST00000365267 102 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 Y_RNA.462-201ENST00000384268 102 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 RNY1P14-201ENST00000384426 108 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 RNU6-710P-201ENST00000410424 105 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 MCFD2P1-201ENST00000417812 300 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 AC092473.1-201ENST00000441098 221 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.14□□□□□ -2.23
SSX3Q99909 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 RNU6-917P-201ENST00000516294 104 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 AC022616.4-201ENST00000522985 181 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 AL080274.1-201ENST00000605565 220 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 AC011373.1-201ENST00000607270 237 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 AC004832.4-201ENST00000608952 331 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
SSX3Q99909 SNORA2.2-201ENST00000365473 135 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 Y_RNA.431-201ENST00000384086 102 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 Y_RNA.439-201ENST00000384119 94 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 SNORA25-201ENST00000384384 134 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 RNU6-163P-201ENST00000384396 106 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 MIR891A-201ENST00000401237 79 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 RPS20P10-201ENST00000451209 253 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 U8.20-201ENST00000459445 131 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 CYCTP-201ENST00000504253 315 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 RNU7-110P-201ENST00000516891 62 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 Y_RNA.713-201ENST00000517013 96 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 RNU6-165P-201ENST00000517170 99 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 RNU6-1116P-201ENST00000517269 99 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 MIR4423-201ENST00000580922 80 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 AL117336.2-201ENST00000602435 335 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 AC005972.2-201ENST00000604690 348 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 BX284668.6-201ENST00000606899 438 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 AL008636.1-201ENST00000625038 1018 ntBASIC1.13□□□□□ -2.23
SSX3Q99909 Y_RNA.112-201ENST00000363250 102 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 RNU4-50P-201ENST00000364361 141 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 RNU6-855P-201ENST00000410395 104 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 AC104332.1-201ENST00000440471 797 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 AC093852.1-201ENST00000503587 266 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 TRMT112P2-201ENST00000512910 132 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.12□□□□□ -2.23
SSX3Q99909 AC120024.3-201ENST00000603167 156 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 AL359821.1-201ENST00000605519 182 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 AL591926.4-201ENST00000616895 298 ntBASIC1.12□□□□□ -2.23
SSX3Q99909 RNU6-833P-201ENST00000363486 107 ntBASIC1.11□□□□□ -2.23
SSX3Q99909 Y_RNA.471-201ENST00000384312 102 ntBASIC1.11□□□□□ -2.23
SSX3Q99909 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.11□□□□□ -2.23
SSX3Q99909 PIGPP3-201ENST00000425307 415 ntBASIC1.11□□□□□ -2.23
SSX3Q99909 AC024067.1-201ENST00000426199 223 ntBASIC1.11□□□□□ -2.23
SSX3Q99909 RNU6-947P-201ENST00000516264 106 ntBASIC1.11□□□□□ -2.23
SSX3Q99909 AC040926.1-201ENST00000530195 238 ntBASIC1.11□□□□□ -2.23
SSX3Q99909 AC068338.1-201ENST00000565567 176 ntBASIC1.11□□□□□ -2.23
SSX3Q99909 AL357312.1-201ENST00000603879 298 ntBASIC1.11□□□□□ -2.23
SSX3Q99909 AC007485.1-201ENST00000616755 206 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms