Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNU4-13P-201ENST00000364019 141 ntBASIC2.3□□□□□ -2.04
SMOQ99835 RNU6-969P-201ENST00000383900 105 ntBASIC2.3□□□□□ -2.04
SMOQ99835 Y_RNA.571-201ENST00000384753 98 ntBASIC2.3□□□□□ -2.04
SMOQ99835 SNORA40.19-201ENST00000390846 128 ntBASIC2.3□□□□□ -2.04
SMOQ99835 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.3□□□□□ -2.04
SMOQ99835 AC099677.2-201ENST00000436385 175 ntBASIC2.3□□□□□ -2.04
SMOQ99835 RPS29P21-201ENST00000496272 170 ntBASIC2.3□□□□□ -2.04
SMOQ99835 RNU7-116P-201ENST00000516940 62 ntBASIC2.3□□□□□ -2.04
SMOQ99835 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SMOQ99835 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.29□□□□□ -2.04
SMOQ99835 Y_RNA.7-201ENST00000362352 102 ntBASIC2.29□□□□□ -2.04
SMOQ99835 RNU6-144P-201ENST00000383951 107 ntBASIC2.29□□□□□ -2.04
SMOQ99835 SNORA64-201ENST00000384674 134 ntBASIC2.29□□□□□ -2.04
SMOQ99835 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
SMOQ99835 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.29□□□□□ -2.04
SMOQ99835 RN7SKP192-201ENST00000411291 327 ntBASIC2.29□□□□□ -2.04
SMOQ99835 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.29□□□□□ -2.04
SMOQ99835 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SMOQ99835 RPL23AP54-201ENST00000495129 419 ntBASIC2.29□□□□□ -2.04
SMOQ99835 RNU7-99P-201ENST00000516271 62 ntBASIC2.29□□□□□ -2.04
SMOQ99835 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
SMOQ99835 RNA5SP137-201ENST00000516833 135 ntBASIC2.29□□□□□ -2.04
SMOQ99835 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
SMOQ99835 RNU1-58P-201ENST00000362413 163 ntBASIC2.28□□□□□ -2.04
SMOQ99835 Y_RNA.238-201ENST00000364441 102 ntBASIC2.28□□□□□ -2.04
SMOQ99835 SNORA67.3-201ENST00000384366 140 ntBASIC2.28□□□□□ -2.04
SMOQ99835 MIR29C-201ENST00000385231 88 ntBASIC2.28□□□□□ -2.04
SMOQ99835 MIR526A2-201ENST00000390198 65 ntBASIC2.28□□□□□ -2.04
SMOQ99835 SCARNA8-201ENST00000515924 131 ntBASIC2.28□□□□□ -2.04
SMOQ99835 Y_RNA.676-201ENST00000516393 96 ntBASIC2.28□□□□□ -2.04
SMOQ99835 RNU6-453P-201ENST00000516819 85 ntBASIC2.28□□□□□ -2.04
SMOQ99835 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SMOQ99835 MIR4648-201ENST00000580107 72 ntBASIC2.28□□□□□ -2.04
SMOQ99835 AL929325.1-201ENST00000603096 117 ntBASIC2.28□□□□□ -2.04
SMOQ99835 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.28□□□□□ -2.04
SMOQ99835 AL359075.3-201ENST00000613288 217 ntBASIC2.28□□□□□ -2.04
SMOQ99835 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.28□□□□□ -2.04
SMOQ99835 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SMOQ99835 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SMOQ99835 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SMOQ99835 Y_RNA.240-201ENST00000364469 95 ntBASIC2.27□□□□□ -2.05
SMOQ99835 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
SMOQ99835 SNORA72-201ENST00000384339 132 ntBASIC2.27□□□□□ -2.05
SMOQ99835 RNU4-70P-201ENST00000384579 139 ntBASIC2.27□□□□□ -2.05
SMOQ99835 SNORA11.4-201ENST00000408823 129 ntBASIC2.27□□□□□ -2.05
SMOQ99835 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.27□□□□□ -2.05
SMOQ99835 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.27□□□□□ -2.05
SMOQ99835 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.27□□□□□ -2.05
SMOQ99835 RNU6-437P-201ENST00000459408 95 ntBASIC2.27□□□□□ -2.05
SMOQ99835 AC091021.1-201ENST00000468051 388 ntBASIC2.27□□□□□ -2.05
SMOQ99835 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.27□□□□□ -2.05
SMOQ99835 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
SMOQ99835 MIR4724-201ENST00000579485 89 ntBASIC2.27□□□□□ -2.05
SMOQ99835 AC091178.2-201ENST00000584401 117 ntBASIC2.27□□□□□ -2.05
SMOQ99835 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
SMOQ99835 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.27□□□□□ -2.05
SMOQ99835 U6.106-201ENST00000636360 105 ntBASIC2.27□□□□□ -2.05
SMOQ99835 ZNF271P-202ENST00000465539 1970 ntBASIC2.27□□□□□ -2.05
SMOQ99835 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SMOQ99835 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SMOQ99835 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SMOQ99835 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SMOQ99835 MIR367-201ENST00000362299 68 ntBASIC2.26□□□□□ -2.05
SMOQ99835 RNU6-1062P-201ENST00000383908 107 ntBASIC2.26□□□□□ -2.05
SMOQ99835 Y_RNA.412-201ENST00000384001 104 ntBASIC2.26□□□□□ -2.05
SMOQ99835 MIR597-201ENST00000384968 97 ntBASIC2.26□□□□□ -2.05
SMOQ99835 MIR1283-2-201ENST00000408621 87 ntBASIC2.26□□□□□ -2.05
SMOQ99835 MIR1278-201ENST00000408753 81 ntBASIC2.26□□□□□ -2.05
SMOQ99835 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.26□□□□□ -2.05
SMOQ99835 Y_RNA.662-201ENST00000516028 97 ntBASIC2.26□□□□□ -2.05
SMOQ99835 RNU1-142P-201ENST00000516682 145 ntBASIC2.26□□□□□ -2.05
SMOQ99835 RNU6-1096P-201ENST00000517089 102 ntBASIC2.26□□□□□ -2.05
SMOQ99835 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
SMOQ99835 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
SMOQ99835 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
SMOQ99835 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.26□□□□□ -2.05
SMOQ99835 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMOQ99835 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMOQ99835 Y_RNA.182-201ENST00000363880 111 ntBASIC2.25□□□□□ -2.05
SMOQ99835 Y_RNA.229-201ENST00000364347 113 ntBASIC2.25□□□□□ -2.05
SMOQ99835 MT-TT-201ENST00000387460 66 ntBASIC2.25□□□□□ -2.05
SMOQ99835 SNORA48.3-201ENST00000391081 134 ntBASIC2.25□□□□□ -2.05
SMOQ99835 RNA5SP323-201ENST00000391094 133 ntBASIC2.25□□□□□ -2.05
SMOQ99835 CST2P1-201ENST00000425770 87 ntBASIC2.25□□□□□ -2.05
SMOQ99835 AC245047.8-201ENST00000456455 284 ntBASIC2.25□□□□□ -2.05
SMOQ99835 RN7SKP164-201ENST00000516138 266 ntBASIC2.25□□□□□ -2.05
SMOQ99835 MRPS18CP4-201ENST00000535821 231 ntBASIC2.25□□□□□ -2.05
SMOQ99835 AC011604.1-201ENST00000545978 196 ntBASIC2.25□□□□□ -2.05
SMOQ99835 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
SMOQ99835 AC245884.12-201ENST00000615364 59 ntBASIC2.25□□□□□ -2.05
SMOQ99835 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.25□□□□□ -2.05
SMOQ99835 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SMOQ99835 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.24□□□□□ -2.05
SMOQ99835 Y_RNA.121-201ENST00000363309 113 ntBASIC2.24□□□□□ -2.05
SMOQ99835 RNU6-674P-201ENST00000363831 107 ntBASIC2.24□□□□□ -2.05
SMOQ99835 SNORA8-201ENST00000384574 139 ntBASIC2.24□□□□□ -2.05
SMOQ99835 MIR518A2-201ENST00000384966 87 ntBASIC2.24□□□□□ -2.05
SMOQ99835 RNU11-3P-201ENST00000391111 133 ntBASIC2.24□□□□□ -2.05
SMOQ99835 HMGN2P39-201ENST00000398005 273 ntBASIC2.24□□□□□ -2.05
SMOQ99835 RPS26P45-201ENST00000471748 340 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms