Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
SNX18Q96RF0 AP006437.1-201ENST00000641440 3685 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 RNU6-774P-201ENST00000363238 107 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 Y_RNA.121-201ENST00000363309 113 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 MIR548M-201ENST00000408260 86 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX18Q96RF0 Y_RNA.797-201ENST00000515977 94 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 RNU6-1007P-201ENST00000516586 107 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 MIR3169-201ENST00000578032 83 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 AL353149.1-201ENST00000610667 244 ntBASIC2.16□□□□□ -2.06
SNX18Q96RF0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX18Q96RF0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.15□□□□□ -2.07
SNX18Q96RF0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
SNX18Q96RF0 Y_RNA.8-201ENST00000362353 102 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 RNU1-58P-201ENST00000362413 163 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 SNORA33-201ENST00000363664 130 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 RNU1-96P-201ENST00000364163 162 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 Y_RNA.229-201ENST00000364347 113 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 RNU1-52P-201ENST00000384190 164 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 RNU5E-9P-201ENST00000411164 104 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX18Q96RF0 BX510359.4-201ENST00000423750 193 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX18Q96RF0 RPS4XP11-201ENST00000446897 772 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 RNU6-437P-201ENST00000459408 95 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 AC091021.1-201ENST00000468051 388 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.15□□□□□ -2.07
SNX18Q96RF0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX18Q96RF0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX18Q96RF0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX18Q96RF0 SNORD53-201ENST00000579969 78 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 MIR4744-201ENST00000581563 82 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 AC007229.1-201ENST00000590455 412 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 AL929325.1-201ENST00000603096 117 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX18Q96RF0 AL590808.1-201ENST00000618696 141 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 AC021753.1-201ENST00000635724 168 ntBASIC2.15□□□□□ -2.07
SNX18Q96RF0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNX18Q96RF0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.14□□□□□ -2.07
SNX18Q96RF0 MIR21-201ENST00000362134 72 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 RNU6-862P-201ENST00000362804 105 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 RNU6-804P-201ENST00000384286 107 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 SNORA72-201ENST00000384339 132 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 MT-TT-201ENST00000387460 66 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 MIR1278-201ENST00000408753 81 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.14□□□□□ -2.07
SNX18Q96RF0 RPS15AP28-201ENST00000435088 386 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 RNU6-1212P-201ENST00000517023 104 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 RNU7-128P-201ENST00000517247 62 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.14□□□□□ -2.07
SNX18Q96RF0 AL359075.3-201ENST00000613288 217 ntBASIC2.14□□□□□ -2.07
SNX18Q96RF0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SNX18Q96RF0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.14□□□□□ -2.07
SNX18Q96RF0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SNX18Q96RF0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.13□□□□□ -2.07
SNX18Q96RF0 Y_RNA.75-201ENST00000362927 97 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 RNU6-103P-201ENST00000363686 107 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 MIR616-201ENST00000385293 97 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 RNU6-578P-201ENST00000390980 103 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 RNU11-3P-201ENST00000391111 133 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 AL117342.1-201ENST00000404861 406 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 MIR1261-201ENST00000408659 82 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 RNU6-1135P-201ENST00000411083 103 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.13□□□□□ -2.07
SNX18Q96RF0 SEPT7P4-201ENST00000437076 306 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.13□□□□□ -2.07
SNX18Q96RF0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.13□□□□□ -2.07
SNX18Q96RF0 RNU7-99P-201ENST00000516271 62 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 RNA5SP24-201ENST00000516478 95 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 AC011604.1-201ENST00000545978 196 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 SNORD14A-201ENST00000606526 91 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 AC103810.6-201ENST00000606708 136 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 AC108706.1-201ENST00000611053 297 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 AC245884.12-201ENST00000615364 59 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 AC064859.1-201ENST00000624741 174 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 U6.108-201ENST00000637764 58 ntBASIC2.13□□□□□ -2.07
SNX18Q96RF0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.13□□□□□ -2.07
SNX18Q96RF0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SNX18Q96RF0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNX18Q96RF0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNX18Q96RF0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNX18Q96RF0 RNU6-275P-201ENST00000364910 107 ntBASIC2.12□□□□□ -2.07
SNX18Q96RF0 RNA5SP323-201ENST00000391094 133 ntBASIC2.12□□□□□ -2.07
SNX18Q96RF0 RNA5SP270-201ENST00000411361 118 ntBASIC2.12□□□□□ -2.07
SNX18Q96RF0 RNU1-142P-201ENST00000516682 145 ntBASIC2.12□□□□□ -2.07
SNX18Q96RF0 MIR5688-201ENST00000580619 83 ntBASIC2.12□□□□□ -2.07
SNX18Q96RF0 MIR4448-201ENST00000584360 86 ntBASIC2.12□□□□□ -2.07
SNX18Q96RF0 CTSLP2-204ENST00000629029 392 ntBASIC2.12□□□□□ -2.07
SNX18Q96RF0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNX18Q96RF0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNX18Q96RF0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNX18Q96RF0 Y_RNA.23-201ENST00000362496 106 ntBASIC2.11□□□□□ -2.07
SNX18Q96RF0 Y_RNA.170-201ENST00000363746 110 ntBASIC2.11□□□□□ -2.07
SNX18Q96RF0 RNU6-674P-201ENST00000363831 107 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms