Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SNORD63.1-201ENST00000516178 80 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 AC097460.3-201ENST00000623099 442 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 RPS29P13-201ENST00000402041 169 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 RNA5SP390-201ENST00000410191 113 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 AL512347.1-201ENST00000566420 503 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 AC073648.5-201ENST00000603502 305 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 AL158042.1-201ENST00000605338 460 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 MIR4756-201ENST00000577874 78 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 MIR8068-201ENST00000618032 68 ntBASIC-1.32□□□□□ -2.62
CSMD1Q96PZ7 SNORD38B-201ENST00000384690 67 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 PSMA6P3-201ENST00000428242 164 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 MTND3P5-201ENST00000512798 333 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 MIR548A2-201ENST00000384956 97 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 ZNF114P1-201ENST00000453500 292 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 AC091951.3-201ENST00000504093 246 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 AC138649.3-201ENST00000622154 254 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 SNORA75.4-201ENST00000391278 119 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 SNRPGP10-201ENST00000432323 225 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 USP9YP28-201ENST00000435142 589 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 AC005178.1-201ENST00000508392 440 ntBASIC-1.33□□□□□ -2.62
CSMD1Q96PZ7 RNU6-230P-201ENST00000362457 104 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 RNU6-142P-201ENST00000384019 107 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 RNU7-28P-201ENST00000516759 62 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 RNU7-128P-201ENST00000517247 62 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 AC104576.1-201ENST00000524225 88 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 AC023158.1-201ENST00000561632 1025 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 AC011373.1-201ENST00000607270 237 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 MIR1273C-201ENST00000578669 77 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 SNORD115-33-201ENST00000363723 82 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 RNU6-188P-201ENST00000364207 107 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 MT-TF-201ENST00000387314 71 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 AC023538.1-201ENST00000534576 736 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 VN1R87P-201ENST00000596706 487 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 MIR6874-201ENST00000635894 71 ntBASIC-1.34□□□□□ -2.62
CSMD1Q96PZ7 RNU6-403P-201ENST00000363163 104 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 RNY1P2-201ENST00000364820 117 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 MIR452-201ENST00000385020 85 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 RNU2-9P-201ENST00000410194 145 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 U6.114-201ENST00000636407 96 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 MIR562-201ENST00000384894 95 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 AL122001.1-201ENST00000457027 370 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 RNU7-74P-201ENST00000459104 62 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 AC015724.1-201ENST00000478577 156 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 AC023510.2-201ENST00000622162 746 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 AL008636.1-201ENST00000625038 1018 ntBASIC-1.35□□□□□ -2.63
CSMD1Q96PZ7 RNU6-545P-201ENST00000362681 104 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AL353572.1-201ENST00000442490 417 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 RNU6-175P-201ENST00000516896 107 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 MIR6740-201ENST00000618268 113 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AC117470.1-201ENST00000381974 330 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 RNU6-878P-201ENST00000384578 110 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 RNU6-987P-201ENST00000384759 104 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 COX7BP2-201ENST00000437976 242 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AC087894.1-201ENST00000538359 518 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AL355375.2-201ENST00000574825 175 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 MIR3923-201ENST00000579521 83 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 RNU6-28P-201ENST00000362378 107 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 SNORD115-13-201ENST00000363358 82 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 RNU6-154P-201ENST00000384306 106 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AC244090.1-201ENST00000441884 93 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AL359672.1-201ENST00000442302 409 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 MIR4473-201ENST00000583731 91 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 AL391834.2-201ENST00000609982 546 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 MIR6082-201ENST00000613604 109 ntBASIC-1.36□□□□□ -2.63
CSMD1Q96PZ7 MIR20A-201ENST00000362279 71 ntBASIC-1.37□□□□□ -2.63
CSMD1Q96PZ7 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.37□□□□□ -2.63
CSMD1Q96PZ7 SNORD115-26-201ENST00000365067 82 ntBASIC-1.37□□□□□ -2.63
CSMD1Q96PZ7 RNU6-128P-201ENST00000383976 107 ntBASIC-1.37□□□□□ -2.63
CSMD1Q96PZ7 RNU6-754P-201ENST00000391166 107 ntBASIC-1.37□□□□□ -2.63
CSMD1Q96PZ7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.37□□□□□ -2.63
CSMD1Q96PZ7 AC120024.3-201ENST00000603167 156 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms