Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.58□□□□□ -2.5
AP1S3Q96PC3 AC103705.1-201ENST00000619013 241 ntBASIC-0.58□□□□□ -2.5
AP1S3Q96PC3 RNU6-281P-201ENST00000384212 103 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 RNU6-517P-201ENST00000384362 110 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 MIR18B-201ENST00000454574 71 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 RNU2-13P-201ENST00000515909 113 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 MTND4P7-201ENST00000523876 130 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 MIR3682-201ENST00000581338 84 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 AC006380.1-201ENST00000603598 186 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 AL357078.3-201ENST00000607528 618 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 AL391834.2-201ENST00000609982 546 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 AC072046.2-201ENST00000618366 268 ntBASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.59□□□□□ -2.5
AP1S3Q96PC3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 MIR501-201ENST00000390204 84 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 SNRPGP14-201ENST00000435400 219 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 AC073415.1-201ENST00000449240 153 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 AL356010.1-201ENST00000456364 102 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 TPTE2P5-203ENST00000458118 728 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 RNU6-189P-201ENST00000516120 101 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 RNA5SP47-201ENST00000517230 109 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 MIR4509-3-201ENST00000578671 94 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 MIR3684-201ENST00000579779 74 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 MIR4509-2-201ENST00000583920 94 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 MIR4509-1-201ENST00000618224 94 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 uc_338.22-201ENST00000622722 187 ntBASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.6□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 SNORD14C-201ENST00000365382 88 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 MIR613-201ENST00000385248 95 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 RNA5SP127-201ENST00000411051 133 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 MTCO1P5-201ENST00000433573 344 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 HMGN2P32-201ENST00000444648 269 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 RNU7-187P-201ENST00000458985 68 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 MTCO3P38-201ENST00000468910 766 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 RNU6-830P-201ENST00000516353 107 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 POLR3GP2-201ENST00000588366 668 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 FAM157A-202ENST00000615155 405 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 Pinc.1-201ENST00000616452 154 ntBASIC-0.61□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 MIR513B-201ENST00000385136 84 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 MIR1257-201ENST00000408490 117 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 RNU6-855P-201ENST00000410395 104 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 AC087499.4-201ENST00000448505 178 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 SNORD126-201ENST00000459475 77 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 MIR3925-201ENST00000584674 77 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 AC121247.2-201ENST00000604776 136 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 MIR8066-201ENST00000617280 78 ntBASIC-0.62□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 SNORD113-7-201ENST00000363762 77 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 RNU6-652P-201ENST00000365488 107 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 MIR196A2-201ENST00000385189 110 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 SNORA40.3-201ENST00000390964 122 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 SNORA40.4-201ENST00000390971 128 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 RNU6-131P-201ENST00000391144 107 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 MCFD2P1-201ENST00000417812 300 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 AC133104.1-201ENST00000429100 218 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 AL031667.1-201ENST00000440222 725 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 MTND1P17-201ENST00000448961 204 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 MTCO2P30-201ENST00000503662 364 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 SNORA31.14-201ENST00000516728 116 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 ELOCP32-201ENST00000548625 324 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 AC245014.2-201ENST00000603689 287 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 AC092747.3-201ENST00000603769 301 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 AL158050.2-201ENST00000605336 568 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 AP001506.1-201ENST00000615444 211 ntBASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.63□□□□□ -2.51
AP1S3Q96PC3 AC106754.1-201ENST00000562632 1513 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 RNU6-740P-201ENST00000364734 105 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 RNU6-933P-201ENST00000384424 107 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 MIR329-1-201ENST00000385028 80 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 RNU6-469P-201ENST00000516253 101 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms