Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU6-790P-201ENST00000384479 105 ntBASIC-0.53□□□□□ -2.49
CCDC42Q96M95 MIR214-201ENST00000385214 110 ntBASIC-0.53□□□□□ -2.49
CCDC42Q96M95 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.53□□□□□ -2.49
CCDC42Q96M95 RNU7-187P-201ENST00000458985 68 ntBASIC-0.53□□□□□ -2.49
CCDC42Q96M95 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.53□□□□□ -2.49
CCDC42Q96M95 MRPS36P3-201ENST00000519284 130 ntBASIC-0.53□□□□□ -2.49
CCDC42Q96M95 AC026371.1-201ENST00000551867 419 ntBASIC-0.53□□□□□ -2.49
CCDC42Q96M95 RNU4-28P-201ENST00000364739 141 ntBASIC-0.54□□□□□ -2.5
CCDC42Q96M95 RNU6-756P-201ENST00000383997 107 ntBASIC-0.54□□□□□ -2.5
CCDC42Q96M95 RNU6-925P-201ENST00000384629 104 ntBASIC-0.54□□□□□ -2.5
CCDC42Q96M95 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.54□□□□□ -2.5
CCDC42Q96M95 MIR3913-1-201ENST00000577744 102 ntBASIC-0.54□□□□□ -2.5
CCDC42Q96M95 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.54□□□□□ -2.5
CCDC42Q96M95 SNORD92-201ENST00000585078 85 ntBASIC-0.54□□□□□ -2.5
CCDC42Q96M95 FAM157A-202ENST00000615155 405 ntBASIC-0.54□□□□□ -2.5
CCDC42Q96M95 MTND1P7-201ENST00000632801 297 ntBASIC-0.54□□□□□ -2.5
CCDC42Q96M95 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.55□□□□□ -2.5
CCDC42Q96M95 MIR125B2-201ENST00000385128 89 ntBASIC-0.55□□□□□ -2.5
CCDC42Q96M95 RNU6-131P-201ENST00000391144 107 ntBASIC-0.55□□□□□ -2.5
CCDC42Q96M95 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.55□□□□□ -2.5
CCDC42Q96M95 UQCRBP2-201ENST00000447827 297 ntBASIC-0.55□□□□□ -2.5
CCDC42Q96M95 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.55□□□□□ -2.5
CCDC42Q96M95 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.55□□□□□ -2.5
CCDC42Q96M95 RNU7-129P-201ENST00000516128 62 ntBASIC-0.55□□□□□ -2.5
CCDC42Q96M95 SNORA18.4-201ENST00000516440 124 ntBASIC-0.55□□□□□ -2.5
CCDC42Q96M95 AC090616.2-202ENST00000584248 222 ntBASIC-0.55□□□□□ -2.5
CCDC42Q96M95 AC106754.1-201ENST00000562632 1513 ntBASIC-0.55□□□□□ -2.5
CCDC42Q96M95 SNORD38C-201ENST00000384381 69 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 RNA5SP127-201ENST00000411051 133 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 RNU7-62P-201ENST00000458856 62 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 HMGN1P10-201ENST00000474557 553 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.56□□□□□ -2.5
CCDC42Q96M95 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.56□□□□□ -2.5
CCDC42Q96M95 SNORA25.10-201ENST00000515926 124 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 RNU4-49P-201ENST00000516080 140 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 RNU6-448P-201ENST00000517052 107 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 AC022616.4-201ENST00000522985 181 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 AC093023.1-201ENST00000547375 507 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 POLR3GP2-201ENST00000588366 668 ntBASIC-0.56□□□□□ -2.5
CCDC42Q96M95 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.56□□□□□ -2.5
CCDC42Q96M95 FGF7P2-201ENST00000332473 296 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 RNU6-38P-201ENST00000384085 107 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 RNU6-269P-201ENST00000391077 97 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.57□□□□□ -2.5
CCDC42Q96M95 AL358934.1-201ENST00000432346 324 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 MIR18B-201ENST00000454574 71 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 SNORD4A-201ENST00000459174 72 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 RNU7-175P-201ENST00000515915 61 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 RNU6-830P-201ENST00000516353 107 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.57□□□□□ -2.5
CCDC42Q96M95 AC005176.2-201ENST00000596933 147 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 MIR7107-201ENST00000611489 80 ntBASIC-0.57□□□□□ -2.5
CCDC42Q96M95 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 RNU6-454P-201ENST00000364292 107 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 SNORA63C-201ENST00000364578 129 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 MIR760-201ENST00000390220 80 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 U8.19-201ENST00000459095 133 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 U8.22-201ENST00000459141 133 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 RNU7-159P-201ENST00000459284 62 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 RNU6-782P-201ENST00000516852 104 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 MIR4791-201ENST00000607666 84 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 AC092807.2-201ENST00000609367 243 ntBASIC-0.58□□□□□ -2.5
CCDC42Q96M95 RNU4-21P-201ENST00000362802 126 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 RNU4-66P-201ENST00000365199 138 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 MIR802-201ENST00000390235 94 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 U8.17-201ENST00000391292 132 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 SNRPGP10-201ENST00000432323 225 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 RNU6-320P-201ENST00000516511 106 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 RNU7-156P-201ENST00000517214 74 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 MIR5696-201ENST00000578474 85 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 uc_338.6-201ENST00000613544 171 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 Pinc.1-201ENST00000616452 154 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 SNORD38B-202ENST00000625943 69 ntBASIC-0.59□□□□□ -2.5
CCDC42Q96M95 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.6□□□□□ -2.51
CCDC42Q96M95 SNORA18.1-201ENST00000363418 128 ntBASIC-0.6□□□□□ -2.51
CCDC42Q96M95 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
CCDC42Q96M95 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.6□□□□□ -2.51
CCDC42Q96M95 MTND3P23-201ENST00000431980 347 ntBASIC-0.6□□□□□ -2.51
CCDC42Q96M95 RNU7-165P-201ENST00000458864 60 ntBASIC-0.6□□□□□ -2.51
CCDC42Q96M95 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.6□□□□□ -2.51
CCDC42Q96M95 SNORD14E-201ENST00000364009 85 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 SNORA2A-201ENST00000383885 135 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 RNU6-128P-201ENST00000383976 107 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 MIR329-1-201ENST00000385028 80 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 SNORD37.1-201ENST00000390968 65 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 SNORA26.5-201ENST00000391215 123 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 PDCL2P1-201ENST00000419302 352 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 MTCO2P27-201ENST00000420740 428 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 AL512326.2-201ENST00000426359 151 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 329.1 ms