Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 MTND3P8-201ENST00000412909 339 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 MTND3P10-201ENST00000450967 341 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 RPS20P10-201ENST00000451209 253 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 RPL17P19-201ENST00000489069 552 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 SNORA74.3-201ENST00000517108 154 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 AC004812.1-201ENST00000540773 146 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 AC007014.2-201ENST00000615581 479 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 AC004467.1-201ENST00000615678 330 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 SEPT14P17-201ENST00000617978 177 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 AC092794.2-201ENST00000620933 563 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
PKNOX2Q96KN3 AC027514.1-201ENST00000588561 1603 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 MIR103A2-201ENST00000362154 78 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 MIR96-201ENST00000362288 78 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 Y_RNA.86-201ENST00000363020 111 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 RNU1-93P-201ENST00000364704 169 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 SNORD114-22-201ENST00000365423 72 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 Y_RNA.404-201ENST00000383978 102 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 AC107399.1-201ENST00000451226 265 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 AC092989.1-201ENST00000481235 277 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 RNU6-408P-201ENST00000515910 100 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 RNU6-307P-201ENST00000516743 106 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 AC131055.1-201ENST00000584626 316 ntBASIC0.58□□□□□ -2.32
PKNOX2Q96KN3 Y_RNA.269-201ENST00000364685 89 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 AC117470.1-201ENST00000381974 330 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 MIR520C-201ENST00000385005 87 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 MIR136-201ENST00000385207 82 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 MIR1185-1-201ENST00000408598 86 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 RPS29P1-201ENST00000465274 159 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 AC113410.1-201ENST00000505029 247 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 AC116353.2-201ENST00000505332 712 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 AC105313.1-201ENST00000509121 353 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 MIR1244-1-201ENST00000612829 85 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 PISRT1.1-201ENST00000616930 107 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 MIR1244-3-201ENST00000635744 85 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 MIR1244-2-201ENST00000636449 85 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 MIR1244-4-202ENST00000636813 85 ntBASIC0.57□□□□□ -2.32
PKNOX2Q96KN3 Y_RNA.122-201ENST00000363331 96 ntBASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 MIR516B2-201ENST00000385190 85 ntBASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 U7.7-201ENST00000459276 60 ntBASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 RNU7-41P-201ENST00000515917 61 ntBASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 RNA5SP220-201ENST00000516298 104 ntBASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 AF235103.2-201ENST00000525753 346 ntBASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 AC109810.1-201ENST00000534066 224 ntBASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 AC023827.1-201ENST00000569247 97 ntBASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 AC002553.4-201ENST00000616896 331 ntBASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
PKNOX2Q96KN3 Y_RNA.88-201ENST00000363029 99 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 SNORA25.3-201ENST00000363205 127 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 RNU6-961P-201ENST00000363893 105 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 SNORD14.1-201ENST00000365609 90 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 MIR15B-201ENST00000385045 98 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 MIR522-201ENST00000385071 87 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 AL031003.1-201ENST00000404229 172 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 MIR1277-201ENST00000408536 78 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 MIR548F1-201ENST00000408667 84 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 AL589823.1-201ENST00000429577 183 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 RPL23AP50-201ENST00000434149 455 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 MIR2053-201ENST00000459295 91 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 SNORA25.10-201ENST00000515926 124 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 MTND4LP26-201ENST00000518144 282 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 AC022616.4-201ENST00000522985 181 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 AC055872.1-201ENST00000570978 278 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 MIR151B-201ENST00000584249 96 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 AC006380.1-201ENST00000603598 186 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 AC023934.1-201ENST00000574529 2389 ntBASIC0.55□□□□□ -2.32
PKNOX2Q96KN3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 RNU6-99P-201ENST00000364721 107 ntBASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 RNU6-1215P-201ENST00000384441 102 ntBASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 SNORA75.4-201ENST00000391278 119 ntBASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 MTND4P28-201ENST00000426217 387 ntBASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 RN7SKP164-201ENST00000516138 266 ntBASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 MIR4764-201ENST00000580680 88 ntBASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 AC025627.3-201ENST00000582078 182 ntBASIC0.54□□□□□ -2.32
PKNOX2Q96KN3 RNA5SP48-201ENST00000363969 126 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 Y_RNA.318-201ENST00000365131 97 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 RNU2-54P-201ENST00000410299 190 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 RNU2-61P-201ENST00000411069 191 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 RNU6-718P-201ENST00000516166 105 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 RNU7-43P-201ENST00000516554 64 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 SNORD45.4-201ENST00000516629 73 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 SNORA18.7-201ENST00000516910 131 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 CYP3A137P-201ENST00000562436 69 ntBASIC0.53□□□□□ -2.32
PKNOX2Q96KN3 AC240442.1-201ENST00000616055 283 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms