Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC011604.1-201ENST00000545978 196 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 MIR2681-201ENST00000581814 105 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 MIR6079-201ENST00000635807 62 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 SNORA3A-201ENST00000364113 130 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 RNU6-47P-201ENST00000383866 107 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 RNU4-70P-201ENST00000384579 139 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 RNU6-918P-201ENST00000391219 106 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 AL512604.1-201ENST00000404812 257 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 Y_RNA.621-201ENST00000411065 96 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 Z98742.3-201ENST00000418637 326 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 AC099677.2-201ENST00000436385 175 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 RPS4XP11-201ENST00000446897 772 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 AC233266.1-201ENST00000454518 96 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 AC107393.1-201ENST00000512403 346 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 RNU7-128P-201ENST00000517247 62 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 AC242852.1-201ENST00000612151 96 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 AC244015.1-201ENST00000622301 99 ntBASIC2.09□□□□□ -2.07
CTHRC1Q96CG8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CTHRC1Q96CG8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 RNU6-674P-201ENST00000363831 107 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 RNU4-10P-201ENST00000364383 140 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.267-201ENST00000364679 109 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 SNORA70B-201ENST00000384210 135 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 MIR597-201ENST00000384968 97 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 AL356320.1-201ENST00000429616 163 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 AC091021.1-201ENST00000468051 388 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 RPS26P45-201ENST00000471748 340 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 TRBV12-1-201ENST00000479785 344 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 RN7SKP164-201ENST00000516138 266 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 RNU6-341P-201ENST00000516973 96 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 MIR4529-201ENST00000578110 78 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 MIR4308-201ENST00000580634 81 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 AC069114.2-201ENST00000604699 304 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 AC245884.12-201ENST00000615364 59 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 MIR6715A-201ENST00000615929 79 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 U1.36-201ENST00000620684 176 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 U6.108-201ENST00000637764 58 ntBASIC2.08□□□□□ -2.08
CTHRC1Q96CG8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 AC100821.1-201ENST00000523153 2479 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.121-201ENST00000363309 113 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 SNORA33-201ENST00000363664 130 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.233-201ENST00000364407 101 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.238-201ENST00000364441 102 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 RNU6-969P-201ENST00000383900 105 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.435-201ENST00000384095 112 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 SNORA48.3-201ENST00000391081 134 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 MIR1283-2-201ENST00000408621 87 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 AC069257.2-201ENST00000441819 155 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 AL358944.1-201ENST00000528537 144 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 MIR5094-201ENST00000578766 85 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 AC091178.2-201ENST00000584401 117 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 AC078899.2-201ENST00000595282 212 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 FTX_2.1-201ENST00000618816 94 ntBASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CTHRC1Q96CG8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RNU6-103P-201ENST00000363686 107 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.203-201ENST00000364106 102 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RNU4-41P-201ENST00000364426 143 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.555-201ENST00000384673 110 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.571-201ENST00000384753 98 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RNA5SP496-201ENST00000391240 109 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RNA5SP425-201ENST00000410336 112 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RNU2-2P-201ENST00000410396 191 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RN7SKP223-201ENST00000410582 62 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RNU6-383P-201ENST00000410864 94 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RN7SKP192-201ENST00000411291 327 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 AC023449.1-201ENST00000454464 154 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.662-201ENST00000516028 97 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 SNORA31.25-201ENST00000517242 134 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 AL929325.1-201ENST00000603096 117 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 RNU2-4P-201ENST00000606190 192 ntBASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CTHRC1Q96CG8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 AC080100.1-201ENST00000624239 5356 ntBASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 RNU6-381P-201ENST00000391259 108 ntBASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 AC104435.1-201ENST00000483483 166 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms