Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.3□□□□□ -2.04
CHMP4CQ96CF2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CHMP4CQ96CF2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CHMP4CQ96CF2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 RNU6-472P-201ENST00000384299 107 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 COX6CP10-201ENST00000416832 224 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 HSPE1P9-201ENST00000440046 311 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 AL606517.2-201ENST00000442855 241 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 AC233266.1-201ENST00000454518 96 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 AC107393.1-201ENST00000512403 346 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 RNU2-56P-201ENST00000516826 190 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 RNU6-341P-201ENST00000516973 96 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 AC015712.3-201ENST00000559380 164 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 AC012493.3-201ENST00000604494 112 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 AC242852.1-201ENST00000612151 96 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 7SK.10-201ENST00000621414 298 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 AC244015.1-201ENST00000622301 99 ntBASIC2.29□□□□□ -2.04
CHMP4CQ96CF2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 MIR335-201ENST00000362173 94 ntBASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 RNU6-1291P-201ENST00000516591 104 ntBASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 AC136628.3-201ENST00000521868 290 ntBASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 MIR4713-201ENST00000582691 75 ntBASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 AC010900.2-201ENST00000604508 210 ntBASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 AL627230.6-201ENST00000611129 280 ntBASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 MIR6845-201ENST00000613182 61 ntBASIC2.28□□□□□ -2.04
CHMP4CQ96CF2 RNU6-463P-201ENST00000384340 107 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 Y_RNA.621-201ENST00000411065 96 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 RPS4XP11-201ENST00000446897 772 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 RPS27P1-201ENST00000450552 247 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 snoU13.27-201ENST00000459278 104 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 RNU7-34P-201ENST00000459394 64 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 RNU6-237P-201ENST00000515985 71 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 RNU6-295P-201ENST00000516901 104 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 RNU7-116P-201ENST00000516940 62 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 AP002004.2-201ENST00000531656 154 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 MIR4769-201ENST00000584126 77 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 AC091178.2-201ENST00000584401 117 ntBASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.27□□□□□ -2.05
CHMP4CQ96CF2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CHMP4CQ96CF2 RN7SKP200-201ENST00000410564 320 ntBASIC2.26□□□□□ -2.05
CHMP4CQ96CF2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.26□□□□□ -2.05
CHMP4CQ96CF2 AL135790.2-201ENST00000437701 267 ntBASIC2.26□□□□□ -2.05
CHMP4CQ96CF2 AC108210.2-201ENST00000503681 201 ntBASIC2.26□□□□□ -2.05
CHMP4CQ96CF2 SNORA27.4-201ENST00000516650 95 ntBASIC2.26□□□□□ -2.05
CHMP4CQ96CF2 MIR4709-201ENST00000577272 72 ntBASIC2.26□□□□□ -2.05
CHMP4CQ96CF2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.26□□□□□ -2.05
CHMP4CQ96CF2 MIR8054-201ENST00000620877 86 ntBASIC2.26□□□□□ -2.05
CHMP4CQ96CF2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 Y_RNA.44-201ENST00000362676 108 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 RNU6-702P-201ENST00000364982 107 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 SNORA4.2-201ENST00000365313 147 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 SNORA72.4-201ENST00000384174 132 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 MIR583-201ENST00000384846 75 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 U8.13-201ENST00000390842 128 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 RNU6-440P-201ENST00000390882 105 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 FTH1P12-201ENST00000432137 551 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 RN7SL274P-201ENST00000492268 272 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 MRPS17P9-201ENST00000511924 393 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 AC022254.1-201ENST00000567857 235 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 MIR4503-201ENST00000582187 83 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 MIR3149-201ENST00000584629 83 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 U2.14-201ENST00000615943 113 ntBASIC2.25□□□□□ -2.05
CHMP4CQ96CF2 RNU6-1323P-201ENST00000384025 107 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 Y_RNA.452-201ENST00000384202 108 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 RNU6-662P-201ENST00000384253 104 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 Y_RNA.518-201ENST00000384552 113 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 RNU2-38P-201ENST00000410856 79 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 HMGN2P19-201ENST00000425149 265 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 AC104332.1-201ENST00000440471 797 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 AC011604.1-201ENST00000545978 196 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 POLR3GP1-201ENST00000594073 261 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 AC100821.1-201ENST00000523153 2479 ntBASIC2.24□□□□□ -2.05
CHMP4CQ96CF2 RNU6-414P-201ENST00000363705 104 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 RNU6-801P-201ENST00000364087 105 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 Y_RNA.265-201ENST00000364677 108 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 SNORA72-201ENST00000384339 132 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 MIR676-201ENST00000390702 67 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 RNU6-360P-201ENST00000390944 104 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 RNA5SP489-201ENST00000410986 109 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 SNORD127-201ENST00000458892 86 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 AC117454.1-201ENST00000491120 168 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 RNA5SP182-201ENST00000516064 82 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 AL358944.1-201ENST00000528537 144 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 AC024405.2-202ENST00000532731 184 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 AL162424.1-201ENST00000602325 221 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 AL929325.1-201ENST00000603096 117 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 SNORA28-201ENST00000606769 126 ntBASIC2.23□□□□□ -2.05
CHMP4CQ96CF2 MIR548AY-201ENST00000617669 107 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms