Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RTF1Q92541 RNU1-96P-201ENST00000364163 162 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 SNORD114-6-201ENST00000364393 72 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 Y_RNA.293-201ENST00000364908 93 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 U8.7-201ENST00000364940 136 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 RNU6-1062P-201ENST00000383908 107 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 SNORA8.3-201ENST00000384679 139 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 MIR626-201ENST00000385032 94 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 PCNPP3-201ENST00000393579 471 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 AL162725.1-201ENST00000435405 301 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.62□□□□□ -1.99
RTF1Q92541 RNU7-172P-201ENST00000517125 64 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 AC121758.2-201ENST00000553271 193 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.62□□□□□ -1.99
RTF1Q92541 Y_RNA.802-201ENST00000614892 130 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 AC245884.12-201ENST00000615364 59 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 U6.106-201ENST00000636360 105 ntBASIC2.62□□□□□ -1.99
RTF1Q92541 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RTF1Q92541 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.62□□□□□ -1.99
RTF1Q92541 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RTF1Q92541 Y_RNA.7-201ENST00000362352 102 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 Y_RNA.121-201ENST00000363309 113 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 RNU1-148P-201ENST00000384472 162 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 MIR29C-201ENST00000385231 88 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 AL591806.2-201ENST00000433122 173 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 RPL23AP42-201ENST00000471152 471 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.61□□□□□ -1.99
RTF1Q92541 AC117454.1-201ENST00000491120 168 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.61□□□□□ -1.99
RTF1Q92541 RNU6-63P-201ENST00000516690 95 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 RNU6-861P-201ENST00000516745 106 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 AC015720.1-201ENST00000565251 277 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 AC127455.1-201ENST00000565496 145 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.61□□□□□ -1.99
RTF1Q92541 MIR338-201ENST00000636369 67 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RTF1Q92541 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RTF1Q92541 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RTF1Q92541 AC068700.1-201ENST00000565862 3754 ntBASIC2.61□□□□□ -1.99
RTF1Q92541 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.6□□□□□ -1.99
RTF1Q92541 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
RTF1Q92541 Y_RNA.240-201ENST00000364469 95 ntBASIC2.6□□□□□ -1.99
RTF1Q92541 RNU11-5P-201ENST00000391216 129 ntBASIC2.6□□□□□ -1.99
RTF1Q92541 RNA5SP511-201ENST00000410487 115 ntBASIC2.6□□□□□ -1.99
RTF1Q92541 ATP5J2P3-201ENST00000451550 258 ntBASIC2.6□□□□□ -1.99
RTF1Q92541 AC022559.1-201ENST00000520905 205 ntBASIC2.6□□□□□ -1.99
RTF1Q92541 MIR4524B-201ENST00000581569 115 ntBASIC2.6□□□□□ -1.99
RTF1Q92541 AC007229.1-201ENST00000590455 412 ntBASIC2.6□□□□□ -1.99
RTF1Q92541 POLR3GP1-201ENST00000594073 261 ntBASIC2.6□□□□□ -1.99
RTF1Q92541 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTF1Q92541 AP006437.1-201ENST00000641440 3685 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 RNU4-13P-201ENST00000364019 141 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 RNU6-1164P-201ENST00000364428 107 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 SNORA6-201ENST00000384033 151 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 Y_RNA.464-201ENST00000384282 110 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 RNU6-417P-201ENST00000384712 107 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 Y_RNA.571-201ENST00000384753 98 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 RNU6-381P-201ENST00000391259 108 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 SNORA36B-201ENST00000410438 131 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 EBAG9P1-201ENST00000418955 543 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.59□□□□□ -1.99
RTF1Q92541 snoU13.23-201ENST00000458863 104 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 Y_RNA.662-201ENST00000516028 97 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 RN7SKP164-201ENST00000516138 266 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 RNU6-1041P-201ENST00000516254 102 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 RNU7-99P-201ENST00000516271 62 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 RNA5SP137-201ENST00000516833 135 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.59□□□□□ -1.99
RTF1Q92541 DEFB122-202ENST00000569013 197 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 MIR3126-201ENST00000577443 74 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.59□□□□□ -1.99
RTF1Q92541 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RTF1Q92541 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RTF1Q92541 RNA5SP493-201ENST00000364115 91 ntBASIC2.58□□□□□ -2
RTF1Q92541 Y_RNA.238-201ENST00000364441 102 ntBASIC2.58□□□□□ -2
RTF1Q92541 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.58□□□□□ -2
RTF1Q92541 MIR515-2-201ENST00000384883 83 ntBASIC2.58□□□□□ -2
RTF1Q92541 MIR515-1-201ENST00000384884 83 ntBASIC2.58□□□□□ -2
RTF1Q92541 U8.13-201ENST00000390842 128 ntBASIC2.58□□□□□ -2
RTF1Q92541 AL117342.1-201ENST00000404861 406 ntBASIC2.58□□□□□ -2
RTF1Q92541 MIR3169-201ENST00000578032 83 ntBASIC2.58□□□□□ -2
RTF1Q92541 MIR4724-201ENST00000579485 89 ntBASIC2.58□□□□□ -2
RTF1Q92541 MIR5089-201ENST00000580047 84 ntBASIC2.58□□□□□ -2
RTF1Q92541 AL359075.3-201ENST00000613288 217 ntBASIC2.58□□□□□ -2
RTF1Q92541 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RTF1Q92541 RNU6-103P-201ENST00000363686 107 ntBASIC2.57□□□□□ -2
RTF1Q92541 SNORA72-201ENST00000384339 132 ntBASIC2.57□□□□□ -2
RTF1Q92541 RNU6-376P-201ENST00000384731 106 ntBASIC2.57□□□□□ -2
RTF1Q92541 RNU6-295P-201ENST00000516901 104 ntBASIC2.57□□□□□ -2
RTF1Q92541 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.57□□□□□ -2
RTF1Q92541 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RTF1Q92541 MIR367-201ENST00000362299 68 ntBASIC2.56□□□□□ -2
RTF1Q92541 RNU6-23P-201ENST00000363283 107 ntBASIC2.56□□□□□ -2
RTF1Q92541 RNU6-674P-201ENST00000363831 107 ntBASIC2.56□□□□□ -2
RTF1Q92541 RNU4-10P-201ENST00000364383 140 ntBASIC2.56□□□□□ -2
RTF1Q92541 MIR583-201ENST00000384846 75 ntBASIC2.56□□□□□ -2
RTF1Q92541 MIR764-201ENST00000390811 85 ntBASIC2.56□□□□□ -2
RTF1Q92541 CST2P1-201ENST00000425770 87 ntBASIC2.56□□□□□ -2
RTF1Q92541 AC025033.1-201ENST00000463883 194 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms