Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB4Q8WW32 AL512605.2-201ENST00000592972 256 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 AC005972.2-201ENST00000604690 348 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB4Q8WW32 U4.1-201ENST00000620349 87 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGB4Q8WW32 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HMGB4Q8WW32 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.164-201ENST00000363709 102 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 RNU4-13P-201ENST00000364019 141 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 MIR562-201ENST00000384894 95 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 RPS4XP11-201ENST00000446897 772 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB4Q8WW32 AC108729.3-201ENST00000513484 108 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 SNORA27.4-201ENST00000516650 95 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 RNU6-1096P-201ENST00000517089 102 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 MIR4713-201ENST00000582691 75 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB4Q8WW32 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB4Q8WW32 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 MIR8054-201ENST00000620877 86 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 7SK.10-201ENST00000621414 298 ntBASIC1.94□□□□□ -2.1
HMGB4Q8WW32 UBE2WP1-201ENST00000362030 340 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.288-201ENST00000364854 92 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 RNU6-1323P-201ENST00000384025 107 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 SNORA72.4-201ENST00000384174 132 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 RNU6-574P-201ENST00000384265 107 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 HSPE1P21-201ENST00000438283 308 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 SNORD127-201ENST00000458892 86 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGB4Q8WW32 SNORA31.10-201ENST00000516482 106 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 RNU6-1291P-201ENST00000516591 104 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 AL078604.3-201ENST00000615580 211 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGB4Q8WW32 AC068647.2-201ENST00000637380 353 ntBASIC1.93□□□□□ -2.1
HMGB4Q8WW32 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGB4Q8WW32 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMGB4Q8WW32 AC100821.1-201ENST00000523153 2479 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.217-201ENST00000364214 105 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.238-201ENST00000364441 102 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.267-201ENST00000364679 109 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.452-201ENST00000384202 108 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 RNU6-440P-201ENST00000390882 105 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 RNU6-360P-201ENST00000390944 104 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 SNORA26.5-201ENST00000391215 123 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 RNU2-14P-201ENST00000411053 191 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGB4Q8WW32 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 AC104332.1-201ENST00000440471 797 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.641-201ENST00000459414 105 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 AC090255.1-201ENST00000495779 349 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGB4Q8WW32 AC012433.1-201ENST00000588916 398 ntBASIC1.92□□□□□ -2.1
HMGB4Q8WW32 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HMGB4Q8WW32 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGB4Q8WW32 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 RNU6-662P-201ENST00000384253 104 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 RNU6-950P-201ENST00000384651 107 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HMGB4Q8WW32 RNU2-38P-201ENST00000410856 79 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGB4Q8WW32 snoU13.27-201ENST00000459278 104 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 RNU7-115P-201ENST00000516433 55 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 SNORA25.15-201ENST00000516487 89 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 AL358944.1-201ENST00000528537 144 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 MIR3149-201ENST00000584629 83 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 U2.14-201ENST00000615943 113 ntBASIC1.91□□□□□ -2.1
HMGB4Q8WW32 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGB4Q8WW32 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HMGB4Q8WW32 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGB4Q8WW32 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.4-201ENST00000362333 112 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 SNORA1B-201ENST00000362535 133 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.44-201ENST00000362676 108 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 RNU6-1272P-201ENST00000362776 107 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.193-201ENST00000363979 102 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 RNU6-1048P-201ENST00000364054 107 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.275-201ENST00000364726 110 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 U8.7-201ENST00000364940 136 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 RNU6-702P-201ENST00000364982 107 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 RNA5SP190-201ENST00000365222 118 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 SNORA72-201ENST00000384339 132 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.562-201ENST00000384695 113 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 RNU6-763P-201ENST00000390865 106 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 SNORA17.3-201ENST00000391159 129 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC233266.1-201ENST00000454518 96 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 RNU6-1132P-201ENST00000459214 107 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.637-201ENST00000459424 114 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC117454.1-201ENST00000491120 168 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 RNU7-116P-201ENST00000516940 62 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 251.6 ms