Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 Y_RNA.527-201ENST00000384573 102 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 RNA5SP212-201ENST00000391223 107 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 AL355796.1-201ENST00000406706 323 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.604-201ENST00000410574 102 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 RPS26P45-201ENST00000471748 340 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 AC022493.2-201ENST00000506122 481 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 RNU6-1012P-201ENST00000516606 109 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 AC024995.1-201ENST00000523014 93 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 RAB11AP2-201ENST00000545905 639 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 AL929325.1-201ENST00000603096 117 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 U6.108-201ENST00000637764 58 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 SNORD1A-201ENST00000364968 72 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.384-201ENST00000383909 102 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.446-201ENST00000384178 104 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 SNORD116-13-201ENST00000384408 92 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.645-201ENST00000391229 102 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 HMGN1P13-201ENST00000505795 138 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 SNORA70.12-201ENST00000516084 153 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 SUMO2P16-201ENST00000519475 264 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 MIR4709-201ENST00000577272 72 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 AC005014.2-201ENST00000607795 599 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 AC243829.6-201ENST00000612652 106 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 U2.1-201ENST00000618978 145 ntBASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
SHROOM3Q8TF72 RNU6-490P-201ENST00000362985 107 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.813-201ENST00000364639 102 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 MRPL42P3-201ENST00000401492 326 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 MTND4LP11-201ENST00000422184 280 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 AL137792.2-201ENST00000443484 235 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 CHEK2P4-201ENST00000450340 246 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 U8.20-201ENST00000459445 131 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 SNORD111.1-201ENST00000516421 86 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 AC040926.1-201ENST00000530195 238 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 AC021506.2-201ENST00000612354 169 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 uc_338.22-201ENST00000622722 187 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 SNORD68-201ENST00000363214 84 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.263-201ENST00000364659 114 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 SNORA25.8-201ENST00000364831 128 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.361-201ENST00000365515 120 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 SNORD42.2-201ENST00000365570 69 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 SNORA48.1-201ENST00000390879 135 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 RNU4-30P-201ENST00000410245 143 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.605-201ENST00000410577 105 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 RPL21P38-201ENST00000418090 167 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.631-201ENST00000459607 101 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 RNU11-2P-201ENST00000516898 142 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 AC005828.6-201ENST00000606610 232 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 MIR6086-201ENST00000638065 55 ntBASIC0.83□□□□□ -2.28
SHROOM3Q8TF72 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 SNORD114-7-201ENST00000362520 77 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 RPEP5-201ENST00000441137 268 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 AC073910.1-201ENST00000445047 438 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 AC091179.3-201ENST00000474761 144 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 RNU7-172P-201ENST00000517125 64 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 AP002001.1-203ENST00000534002 267 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 AC240442.1-201ENST00000616055 283 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 AL627230.5-201ENST00000619807 58 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 MIR3674-201ENST00000636576 68 ntBASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SHROOM3Q8TF72 RNU6-1115P-201ENST00000362490 106 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.31-201ENST00000362574 102 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.197-201ENST00000364004 102 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.252-201ENST00000364556 101 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.267-201ENST00000364679 109 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 RNU6-310P-201ENST00000384655 107 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 AC022028.1-201ENST00000412054 408 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 TOMM22P2-201ENST00000430735 237 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 AC005002.2-201ENST00000438228 269 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 RNU6-436P-201ENST00000516171 114 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 SNORA40.14-201ENST00000516543 86 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.702-201ENST00000516843 96 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 MIR5701-3-201ENST00000578890 82 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 MIR5701-1-201ENST00000585138 82 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 AC011476.5-201ENST00000615594 130 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 MIR5701-2-201ENST00000615634 82 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 AC007485.1-201ENST00000616755 206 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 U6.115-201ENST00000636045 103 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 MIR424-201ENST00000362227 98 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 SNORA1B-201ENST00000362535 133 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 RNU6-1266P-201ENST00000362794 105 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.138-201ENST00000363462 102 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.356-201ENST00000365475 113 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 SNORA22B-201ENST00000383876 138 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 RNU6-35P-201ENST00000384530 107 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 MIR30A-201ENST00000385092 71 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms