Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.99□□□□□ -2.57
SPTSSBQ8NFR3 AC134878.1-201ENST00000619901 243 ntBASIC-0.99□□□□□ -2.57
SPTSSBQ8NFR3 AC009878.1-201ENST00000621819 340 ntBASIC-0.99□□□□□ -2.57
SPTSSBQ8NFR3 Y_RNA.270-201ENST00000364693 104 ntBASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 Y_RNA.319-201ENST00000365138 92 ntBASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 RNU6-136P-201ENST00000384663 107 ntBASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 MIR224-201ENST00000384889 81 ntBASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 U8.17-201ENST00000391292 132 ntBASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 MIR876-201ENST00000401147 81 ntBASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 Y_RNA.617-201ENST00000410920 90 ntBASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 AC064836.2-201ENST00000609491 462 ntBASIC-1□□□□□ -2.57
SPTSSBQ8NFR3 SNORD114-7-201ENST00000362520 77 ntBASIC-1.01□□□□□ -2.57
SPTSSBQ8NFR3 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.01□□□□□ -2.57
SPTSSBQ8NFR3 RNA5SP205-201ENST00000364653 136 ntBASIC-1.01□□□□□ -2.57
SPTSSBQ8NFR3 SNRPGP10-201ENST00000432323 225 ntBASIC-1.01□□□□□ -2.57
SPTSSBQ8NFR3 Y_RNA.676-201ENST00000516393 96 ntBASIC-1.01□□□□□ -2.57
SPTSSBQ8NFR3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.01□□□□□ -2.57
SPTSSBQ8NFR3 AC023510.2-201ENST00000622162 746 ntBASIC-1.01□□□□□ -2.57
SPTSSBQ8NFR3 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 RNU6-280P-201ENST00000364145 104 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 SNORD38C-201ENST00000384381 69 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 MIR563-201ENST00000385080 79 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 RNU6-159P-201ENST00000391080 106 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 MTCO2P27-201ENST00000420740 428 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 AC104850.1-201ENST00000435940 476 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 AL138752.1-201ENST00000452964 351 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 MIR4493-201ENST00000584016 73 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 AC244669.1-204ENST00000621564 178 ntBASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.02□□□□□ -2.57
SPTSSBQ8NFR3 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 RNU6-660P-201ENST00000364566 109 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 MIR329-1-201ENST00000385028 80 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 MT-TF-201ENST00000387314 71 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 MTCO1P20-201ENST00000425366 358 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 AC074198.2-201ENST00000508153 258 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 CPDP1-201ENST00000579660 283 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 PIGPP4-201ENST00000584447 307 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 AL136370.1-201ENST00000608166 691 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 SNORA70.25-201ENST00000612741 95 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 MIR6507-201ENST00000613630 70 ntBASIC-1.03□□□□□ -2.57
SPTSSBQ8NFR3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 Y_RNA.269-201ENST00000364685 89 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 MIR588-201ENST00000384900 83 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 MIR518F-201ENST00000384973 87 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-847P-201ENST00000411115 108 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 SNRPGP14-201ENST00000435400 219 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 AL512286.1-201ENST00000439244 400 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 RNU7-73P-201ENST00000458743 63 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 AC107297.1-201ENST00000459991 176 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 SNORA25.10-201ENST00000515926 124 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 AP001542.1-201ENST00000591314 200 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 U2.17-201ENST00000611454 95 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.04□□□□□ -2.58
SPTSSBQ8NFR3 MIR30D-201ENST00000362283 70 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-740P-201ENST00000364734 105 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 MIR153-2-201ENST00000385225 87 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 AL008987.1-201ENST00000415528 237 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 GPR143P-201ENST00000434155 205 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 snoU13.2-201ENST00000459201 104 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 snoU13.16-201ENST00000459350 104 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-276P-201ENST00000516114 96 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 SNORA19.3-201ENST00000516165 130 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 AL162376.1-201ENST00000624117 175 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 U6.115-201ENST00000636045 103 ntBASIC-1.05□□□□□ -2.58
SPTSSBQ8NFR3 MIR101-2-201ENST00000362195 79 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 RNU4-92P-201ENST00000363783 136 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-108P-201ENST00000365558 107 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 MIR604-201ENST00000384880 94 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-131P-201ENST00000391144 107 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 MIR548L-201ENST00000408303 86 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-855P-201ENST00000410395 104 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 RNU4-63P-201ENST00000411313 118 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 MTCO2P21-201ENST00000419780 677 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-107P-201ENST00000516643 102 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 Vault.3-201ENST00000516676 95 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 AP001328.1-201ENST00000528550 176 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 MIR5589-201ENST00000579442 60 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 AC009248.2-201ENST00000619826 254 ntBASIC-1.06□□□□□ -2.58
SPTSSBQ8NFR3 ZNF299P-201ENST00000406845 1804 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 RNA5SP257-201ENST00000363023 116 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-324P-201ENST00000363957 106 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 SNORA1.2-201ENST00000365189 134 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms