Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORA72.1-201ENST00000363485 129 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 RNY4P6-201ENST00000363667 96 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-596P-201ENST00000365395 98 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 MIR136-201ENST00000385207 82 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 UQCRBP2-201ENST00000447827 297 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 ZNF114P1-201ENST00000453500 292 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 RNU4-49P-201ENST00000516080 140 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-977P-201ENST00000516411 103 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 MTND4LP26-201ENST00000518144 282 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 MIR4432-201ENST00000581823 84 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 MIR4424-201ENST00000585257 86 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-934P-201ENST00000365154 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 U8.17-201ENST00000391292 132 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 SNORD83.1-201ENST00000411362 77 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC092447.3-201ENST00000426027 686 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 POLR2KP2-201ENST00000438155 177 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 SNORD4A-201ENST00000459174 72 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AP002963.1-201ENST00000530590 184 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC124303.1-201ENST00000605703 360 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AP001330.5-201ENST00000607176 411 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MIR8064-201ENST00000612863 90 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC009161.2-201ENST00000624626 138 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-428P-201ENST00000362942 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AL031003.1-201ENST00000404229 172 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 SCARNA18-201ENST00000459004 134 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RPL23AP75-201ENST00000491601 451 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNA5SP94-201ENST00000516917 108 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AL133173.2-201ENST00000614270 90 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MIRLET7C-201ENST00000362160 84 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 SNORA25.3-201ENST00000363205 127 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 SNORA24-201ENST00000384096 131 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MTND2P22-201ENST00000444325 1033 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU7-62P-201ENST00000458856 62 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC091179.3-201ENST00000474761 144 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MTCO1P29-201ENST00000496868 288 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 TPTEP1-208ENST00000636884 213 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 SNORA1B-201ENST00000362535 133 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MIR106A-201ENST00000384870 81 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 snoU13.2-201ENST00000459201 104 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC026782.1-201ENST00000512952 449 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MIR4676-201ENST00000583078 72 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-873P-201ENST00000363833 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MIR520G-201ENST00000385064 90 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AL606923.1-201ENST00000406616 190 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MTND3P9-201ENST00000429526 346 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MTND4P32-201ENST00000437189 1237 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-947P-201ENST00000516264 106 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 SNORA18.6-201ENST00000516792 115 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MTND4P7-201ENST00000523876 130 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC090897.1-201ENST00000580909 226 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MIR2681-201ENST00000581814 105 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 POLR3GP1-201ENST00000594073 261 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 ZNF299P-201ENST00000406845 1804 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-181P-201ENST00000363225 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-119P-201ENST00000364882 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-46P-201ENST00000383860 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-364P-201ENST00000384387 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 ZNF885P-201ENST00000420174 1098 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RPL39P5-202ENST00000512505 151 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 SNORA18.7-201ENST00000516910 131 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-445P-201ENST00000516949 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AGGF1P4-201ENST00000568249 801 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 Z84480.1-201ENST00000605131 311 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC006504.8-201ENST00000621046 635 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNA5SP117-201ENST00000365294 118 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-284P-201ENST00000411105 106 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU4-63P-201ENST00000411313 118 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-430P-201ENST00000517078 107 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC093023.1-201ENST00000547375 507 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 MIR548AO-201ENST00000579992 96 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 AC127459.3-201ENST00000624328 466 ntBASIC-0.02□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms