Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 Y_RNA.396-201ENST00000383949 103 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-514P-201ENST00000384208 107 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 SNORD116-13-201ENST00000384408 92 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.518-201ENST00000384552 113 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.556-201ENST00000384677 113 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-482P-201ENST00000391068 107 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 AC009310.1-201ENST00000414414 451 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 AC244636.1-201ENST00000421152 228 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 AL135790.2-201ENST00000437701 267 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 RNA5SP437-201ENST00000517249 129 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 DEFB108E-201ENST00000524692 240 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 MIR4769-201ENST00000584126 77 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 AC004832.4-201ENST00000608952 331 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 MIR8081-201ENST00000611533 95 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 AL353997.5-201ENST00000618886 171 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 MIR6079-201ENST00000635807 62 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.237-201ENST00000364439 102 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-196P-201ENST00000384315 107 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 RNA5SP109-201ENST00000391010 116 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 AL162725.1-201ENST00000435405 301 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 AL606517.2-201ENST00000442855 241 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 RPS27P1-201ENST00000450552 247 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 RPS20P10-201ENST00000451209 253 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 RPL36AP21-201ENST00000490372 323 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 SERF1AP1-201ENST00000514575 187 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-237P-201ENST00000515985 71 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 SNORA31.17-201ENST00000516953 127 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 AC015720.1-201ENST00000565251 277 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 AC022217.4-201ENST00000604389 163 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 AC010900.2-201ENST00000604508 210 ntBASIC1.73□□□□□ -2.13
PCDH20Q8N6Y1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 MIR335-201ENST00000362173 94 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.144-201ENST00000363521 113 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 RNA5SP190-201ENST00000365222 118 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 MIR520G-201ENST00000385064 90 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 RNA5SP511-201ENST00000410487 115 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 RNU2-7P-201ENST00000410794 178 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 AC091021.1-201ENST00000468051 388 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 AC091959.1-201ENST00000495857 238 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 AC091178.2-201ENST00000584401 117 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 AL512605.2-201ENST00000592972 256 ntBASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PCDH20Q8N6Y1 AL391987.6-201ENST00000305671 199 ntBASIC1.71□□□□□ -2.14
PCDH20Q8N6Y1 RNU1-17P-201ENST00000363022 152 ntBASIC1.71□□□□□ -2.14
PCDH20Q8N6Y1 Y_RNA.288-201ENST00000364854 92 ntBASIC1.71□□□□□ -2.14
PCDH20Q8N6Y1 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
PCDH20Q8N6Y1 RNU6-136P-201ENST00000384663 107 ntBASIC1.71□□□□□ -2.14
PCDH20Q8N6Y1 AC245047.3-201ENST00000429428 127 ntBASIC1.71□□□□□ -2.14
PCDH20Q8N6Y1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 RNU4-13P-201ENST00000364019 141 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 RNU6-463P-201ENST00000384340 107 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 MIR562-201ENST00000384894 95 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 RNU6-341P-201ENST00000516973 96 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 AC136628.3-201ENST00000521868 290 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 MIR4503-201ENST00000582187 83 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 AC005972.2-201ENST00000604690 348 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 U4.1-201ENST00000620349 87 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 7SK.10-201ENST00000621414 298 ntBASIC1.7□□□□□ -2.14
PCDH20Q8N6Y1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 RNA5SP99-201ENST00000364020 114 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 SNORA4.2-201ENST00000365313 147 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 HSPE1P21-201ENST00000438283 308 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 HSPE1P9-201ENST00000440046 311 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 RPS4XP11-201ENST00000446897 772 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 SNORD13-201ENST00000459299 104 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 Y_RNA.668-201ENST00000516233 93 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 MIR4713-201ENST00000582691 75 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 U2.14-201ENST00000615943 113 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 MIR8054-201ENST00000620877 86 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 AC068647.2-201ENST00000637380 353 ntBASIC1.69□□□□□ -2.14
PCDH20Q8N6Y1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PCDH20Q8N6Y1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PCDH20Q8N6Y1 UBE2WP1-201ENST00000362030 340 ntBASIC1.68□□□□□ -2.14
PCDH20Q8N6Y1 RNA5SP432-201ENST00000362480 116 ntBASIC1.68□□□□□ -2.14
PCDH20Q8N6Y1 RNU6-801P-201ENST00000364087 105 ntBASIC1.68□□□□□ -2.14
PCDH20Q8N6Y1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.68□□□□□ -2.14
PCDH20Q8N6Y1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.68□□□□□ -2.14
PCDH20Q8N6Y1 SNORA72.4-201ENST00000384174 132 ntBASIC1.68□□□□□ -2.14
PCDH20Q8N6Y1 Y_RNA.452-201ENST00000384202 108 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms