Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 Y_RNA.528-201ENST00000384575 108 ntBASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 Y_RNA.549-201ENST00000384657 102 ntBASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 SNORA26.2-201ENST00000390922 122 ntBASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 SNORD77.4-201ENST00000516158 81 ntBASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 RNU6-56P-201ENST00000516986 93 ntBASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 AC091544.4-201ENST00000555268 342 ntBASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 AC105245.1-201ENST00000581934 244 ntBASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 uc_338.4-201ENST00000616635 176 ntBASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TTC9BQ8N6N2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 RNA5SP289-201ENST00000362332 137 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 SNORD32B-201ENST00000364460 84 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 RNA5SP125-201ENST00000364843 120 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 RNU6-756P-201ENST00000383997 107 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 SNORD12C-201ENST00000386307 89 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 SNORA26.7-201ENST00000391288 122 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 RNU2-32P-201ENST00000411193 191 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 AC009414.1-201ENST00000427200 443 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 Z98742.2-201ENST00000431564 187 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 RPS27P22-201ENST00000478056 241 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 AC010598.1-201ENST00000510378 103 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 MIR3129-201ENST00000581095 76 ntBASIC2.7□□□□□ -1.98
TTC9BQ8N6N2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 SNORD114-7-201ENST00000362520 77 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 RNA5SP210-201ENST00000391034 120 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 CALM2P4-201ENST00000430810 426 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 AL021397.1-201ENST00000451806 248 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 RPL36AP21-201ENST00000490372 323 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 SEM1P1-201ENST00000506694 209 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 ATP5EP1-201ENST00000510257 156 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 AC008413.1-201ENST00000511864 177 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 RNU7-149P-201ENST00000516739 59 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 AL160236.1-201ENST00000556317 195 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 AC007012.1-201ENST00000567192 175 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 MIR4435-1-201ENST00000582552 80 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 Pinc.1-201ENST00000616452 154 ntBASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.69□□□□□ -1.98
TTC9BQ8N6N2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 SNORD56.5-201ENST00000364281 72 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 SNORA51.5-201ENST00000384126 131 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 RNU6-750P-201ENST00000390946 107 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 SNORD72-201ENST00000390994 80 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 RNA5SP127-201ENST00000411051 133 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 UBBP3-201ENST00000445497 241 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 SNORD11-201ENST00000459124 84 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 AC010531.2-201ENST00000465012 153 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 RNU6-412P-201ENST00000516434 106 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 RNA5SP153-201ENST00000516498 76 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 AC007751.1-201ENST00000529260 376 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 MIR3117-201ENST00000584034 78 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 AC009831.4-201ENST00000620744 325 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 AC108206.1-201ENST00000570186 4159 ntBASIC2.68□□□□□ -1.98
TTC9BQ8N6N2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 RNU6-1209P-201ENST00000363655 107 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 Y_RNA.163-201ENST00000363702 113 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 Y_RNA.328-201ENST00000365208 113 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 RNU6-418P-201ENST00000384035 107 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 Y_RNA.486-201ENST00000384398 107 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 MIR27B-201ENST00000385129 97 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 MIR891A-201ENST00000401237 79 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 RNA5SP508-201ENST00000411327 119 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 RPS4XP11-201ENST00000446897 772 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 AC023449.1-201ENST00000454464 154 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 RNU6-221P-201ENST00000459541 99 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 AC018630.3-201ENST00000542637 96 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 MIR3945-201ENST00000581853 98 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 AC097639.2-201ENST00000603159 172 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 AL035470.1-201ENST00000622571 220 ntBASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
TTC9BQ8N6N2 AL159152.1-201ENST00000635019 2587 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 RNU6-766P-201ENST00000362478 107 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 SNORA63.5-201ENST00000363548 123 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 Y_RNA.796-201ENST00000364268 102 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 Y_RNA.281-201ENST00000364774 94 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 Y_RNA.799-201ENST00000364992 102 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 RNU6-117P-201ENST00000365415 107 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 SNORA1-201ENST00000384107 130 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 RNU6-975P-201ENST00000384296 105 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 AF228730.3-201ENST00000436691 102 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 AP001318.4-201ENST00000616637 121 ntBASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TTC9BQ8N6N2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms