Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 Y_RNA.243-201ENST00000364481 109 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 Y_RNA.287-201ENST00000364853 94 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 SNORA8-201ENST00000384574 139 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 MIR569-201ENST00000385228 96 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 AL355796.1-201ENST00000406706 323 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KRT78Q8N1N4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.29□□□□□ -2.04
KRT78Q8N1N4 AL121890.1-201ENST00000435457 205 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 AC018634.1-201ENST00000437554 401 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.29□□□□□ -2.04
KRT78Q8N1N4 RNA5SP20-201ENST00000515976 84 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 RNVU1-2-201ENST00000516326 135 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.29□□□□□ -2.04
KRT78Q8N1N4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KRT78Q8N1N4 Y_RNA.23-201ENST00000362496 106 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 SNORA27.1-201ENST00000362604 124 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 Y_RNA.75-201ENST00000362927 97 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 SNORD115-30-201ENST00000364117 82 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
KRT78Q8N1N4 RNU11-5P-201ENST00000391216 129 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 RNA5SP467-201ENST00000391274 118 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 AL031003.1-201ENST00000404229 172 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 AL512604.1-201ENST00000404812 257 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 AL355497.1-201ENST00000406262 551 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 RNU2-7P-201ENST00000410794 178 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 Y_RNA.629-201ENST00000411368 105 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 AC069257.2-201ENST00000441819 155 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 U8.19-201ENST00000459095 133 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 Y_RNA.637-201ENST00000459424 114 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 AC234781.5-201ENST00000508429 271 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 AC103810.6-201ENST00000606708 136 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 Y_RNA.778-201ENST00000620203 90 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.28□□□□□ -2.04
KRT78Q8N1N4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.27□□□□□ -2.05
KRT78Q8N1N4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRT78Q8N1N4 MIR21-201ENST00000362134 72 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 Y_RNA.329-201ENST00000365209 107 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 RNU4-17P-201ENST00000365598 141 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 RNU6-44P-201ENST00000384045 107 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 AL117342.1-201ENST00000404861 406 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 EBAG9P1-201ENST00000418955 543 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 AC099677.2-201ENST00000436385 175 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 RPS20P10-201ENST00000451209 253 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.27□□□□□ -2.05
KRT78Q8N1N4 AC024995.1-201ENST00000523014 93 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.27□□□□□ -2.05
KRT78Q8N1N4 AL137847.3-201ENST00000611521 109 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 U6.73-201ENST00000619194 103 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 AC022513.1-201ENST00000624512 117 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 AC010332.2-201ENST00000613083 1904 ntBASIC2.27□□□□□ -2.05
KRT78Q8N1N4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRT78Q8N1N4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRT78Q8N1N4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
KRT78Q8N1N4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
KRT78Q8N1N4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRT78Q8N1N4 RNU4-10P-201ENST00000364383 140 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 Y_RNA.353-201ENST00000365440 108 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 SNORA20-201ENST00000384662 132 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 MIR634-201ENST00000385208 97 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 RNU6-763P-201ENST00000390865 106 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 AL158823.1-201ENST00000418441 478 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 AC008267.6-201ENST00000441664 139 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 RNU6-971P-201ENST00000516920 106 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 RNU7-172P-201ENST00000517125 64 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.26□□□□□ -2.05
KRT78Q8N1N4 MIR6840-201ENST00000611937 71 ntBASIC2.26□□□□□ -2.05
KRT78Q8N1N4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
KRT78Q8N1N4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.26□□□□□ -2.05
KRT78Q8N1N4 Y_RNA.121-201ENST00000363309 113 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 Y_RNA.218-201ENST00000364218 104 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 RNA5SP205-201ENST00000364653 136 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 RNU6-275P-201ENST00000364910 107 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 RNU6-215P-201ENST00000365169 102 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 RNU6-376P-201ENST00000384731 106 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 MIR17-201ENST00000385012 84 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 RNU6-239P-201ENST00000390990 99 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.25□□□□□ -2.05
KRT78Q8N1N4 RPL23AP6-201ENST00000446637 472 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 RPL23AP7-203ENST00000449021 469 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 AC005840.1-201ENST00000498412 377 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 SNORA25.12-201ENST00000516202 82 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 AC100767.1-201ENST00000528178 123 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.25□□□□□ -2.05
KRT78Q8N1N4 MIR548X2-201ENST00000579776 100 ntBASIC2.25□□□□□ -2.05
KRT78Q8N1N4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
KRT78Q8N1N4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRT78Q8N1N4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRT78Q8N1N4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
KRT78Q8N1N4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRT78Q8N1N4 AC068700.1-201ENST00000565862 3754 ntBASIC2.24□□□□□ -2.05
KRT78Q8N1N4 SNORD114-7-201ENST00000362520 77 ntBASIC2.24□□□□□ -2.05
KRT78Q8N1N4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 271.2 ms