Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 AP000567.1-201ENST00000406413 156 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 MIR1253-201ENST00000408273 105 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 AC069257.2-201ENST00000441819 155 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 RPL36AP48-201ENST00000485521 314 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 AC108729.3-201ENST00000513484 108 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 Y_RNA.714-201ENST00000517065 90 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 AC140658.3-201ENST00000567603 271 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 MIR3134-201ENST00000579433 74 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 SCARNA15.3-201ENST00000626315 122 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 SCARNA4.1-201ENST00000628597 123 ntBASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPAS3Q8IXF0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 RNU6-1313P-201ENST00000362622 102 ntBASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 Y_RNA.171-201ENST00000363760 102 ntBASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 RNA5SP42-201ENST00000364278 115 ntBASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 Z98941.1-201ENST00000407764 100 ntBASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 RHEBP3-201ENST00000411920 351 ntBASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 RPS29P31-201ENST00000446147 164 ntBASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 AC087685.1-201ENST00000587507 141 ntBASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS3Q8IXF0 RNU6-1094P-201ENST00000362416 104 ntBASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 RNU6-315P-201ENST00000362666 107 ntBASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 Y_RNA.299-201ENST00000364973 94 ntBASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 SNORD77B-201ENST00000391112 67 ntBASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 AC099677.2-201ENST00000436385 175 ntBASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 AC006441.5-201ENST00000612680 209 ntBASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPAS3Q8IXF0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 RNU6-478P-201ENST00000363904 110 ntBASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 RNU6-268P-201ENST00000364174 107 ntBASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 RNU6-1163P-201ENST00000364516 107 ntBASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 RNU6-442P-201ENST00000383968 104 ntBASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 MIR522-201ENST00000385071 87 ntBASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 RNU6-129P-201ENST00000391022 107 ntBASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 RNU7-113P-201ENST00000459273 62 ntBASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 SEPT14P17-201ENST00000617978 177 ntBASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.53□□□□□ -1.84
NPAS3Q8IXF0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 SNORD14E-201ENST00000364009 85 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 FTH1P12-201ENST00000432137 551 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 HMGN2P34-201ENST00000437647 269 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 SCARNA18B-201ENST00000458806 135 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 SNORD108-201ENST00000459332 71 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 SNORA31.4-201ENST00000516049 129 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 RNU7-153P-201ENST00000516455 62 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 RNA5SP309-201ENST00000516670 106 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 AC021613.1-201ENST00000623880 111 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 AC096644.4-201ENST00000563417 2912 ntBASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPAS3Q8IXF0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 RNU6-1084P-201ENST00000362498 107 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 SNORD68-201ENST00000363214 84 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 RNU6-283P-201ENST00000364788 107 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 POLR2J4-204ENST00000418424 324 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 AL161932.1-201ENST00000437408 146 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 AL450471.1-201ENST00000447509 127 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 MIR1270-201ENST00000459320 83 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 RNU7-45P-201ENST00000459460 63 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 RNU6-1258P-201ENST00000516911 111 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 EIF4BP1-201ENST00000554881 351 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 MIR548AE2-201ENST00000583456 67 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS3Q8IXF0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 AC009487.4-201ENST00000624969 3585 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 RNU4-32P-201ENST00000363404 141 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 RPS15AP28-201ENST00000435088 386 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 AC025750.2-201ENST00000442609 450 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 S100A11P2-201ENST00000467589 312 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 UBL5P1-201ENST00000507979 193 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 SNORA70.14-201ENST00000516205 110 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 RNA5SP341-201ENST00000516261 117 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 RNA5SP33-201ENST00000516687 98 ntBASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.5□□□□□ -1.85
NPAS3Q8IXF0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms