Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AL162725.1-201ENST00000435405 301 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 SNORD127-201ENST00000458892 86 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 AC004817.2-201ENST00000561794 651 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 AC015720.1-201ENST00000565251 277 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 AC022254.1-201ENST00000567857 235 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 AL353997.5-201ENST00000618886 171 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 AC084768.2-201ENST00000622736 221 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 MIR6079-201ENST00000635807 62 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 MIR562-201ENST00000384894 95 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 RNA5SP511-201ENST00000410487 115 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 RNU2-38P-201ENST00000410856 79 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 AL135790.2-201ENST00000437701 267 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 AC091021.1-201ENST00000468051 388 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 RPS29P11-201ENST00000496507 171 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 SNORA27.4-201ENST00000516650 95 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 AC136628.3-201ENST00000521868 290 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 AC005972.2-201ENST00000604690 348 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 U2.14-201ENST00000615943 113 ntBASIC1.92□□□□□ -2.1
SCN4BQ8IWT1 UBE2WP1-201ENST00000362030 340 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 Y_RNA.14-201ENST00000362415 103 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 Y_RNA.44-201ENST00000362676 108 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 SNORA16.1-201ENST00000364597 132 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 RNU6-296P-201ENST00000384608 107 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 RNU6-136P-201ENST00000384663 107 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 HSPE1P21-201ENST00000438283 308 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 RNU6-1132P-201ENST00000459214 107 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 AC091178.2-201ENST00000584401 117 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 AC062037.2-201ENST00000610137 73 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.91□□□□□ -2.1
SCN4BQ8IWT1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 RNA5SP109-201ENST00000391010 116 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 MIR548H3-201ENST00000408771 118 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 AC245047.3-201ENST00000429428 127 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 RPL39P38-201ENST00000467018 153 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 AC107393.1-201ENST00000512403 346 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 RNU6-237P-201ENST00000515985 71 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 SNORA25.15-201ENST00000516487 89 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 RNA5SP481-201ENST00000516814 122 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 RNU6-341P-201ENST00000516973 96 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 RNA5SP437-201ENST00000517249 129 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 AC012433.1-201ENST00000588916 398 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 AC022217.4-201ENST00000604389 163 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 AL078604.3-201ENST00000615580 211 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 AC068647.2-201ENST00000637380 353 ntBASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SCN4BQ8IWT1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 RNU6-801P-201ENST00000364087 105 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 Y_RNA.352-201ENST00000365439 102 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 SNORA72.4-201ENST00000384174 132 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 RNU6-662P-201ENST00000384253 104 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 Y_RNA.562-201ENST00000384695 113 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 AL606517.2-201ENST00000442855 241 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 RPS4XP11-201ENST00000446897 772 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 RPS27P1-201ENST00000450552 247 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 RNU7-116P-201ENST00000516940 62 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 SNORA31.17-201ENST00000516953 127 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 AC010900.2-201ENST00000604508 210 ntBASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SCN4BQ8IWT1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 RNU6-1272P-201ENST00000362776 107 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 RNU1-17P-201ENST00000363022 152 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 Y_RNA.217-201ENST00000364214 105 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 Y_RNA.350-201ENST00000365409 98 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 RNU6-950P-201ENST00000384651 107 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 RNU6-482P-201ENST00000391068 107 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 AC104332.1-201ENST00000440471 797 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 Y_RNA.641-201ENST00000459414 105 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.88□□□□□ -2.11
SCN4BQ8IWT1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SCN4BQ8IWT1 RNU6-763P-201ENST00000390865 106 ntBASIC1.87□□□□□ -2.11
SCN4BQ8IWT1 SNORA26.5-201ENST00000391215 123 ntBASIC1.87□□□□□ -2.11
SCN4BQ8IWT1 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
SCN4BQ8IWT1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN4BQ8IWT1 BTF3P11-201ENST00000426582 477 ntBASIC1.87□□□□□ -2.11
SCN4BQ8IWT1 SNORA44.1-201ENST00000517031 108 ntBASIC1.87□□□□□ -2.11
SCN4BQ8IWT1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 420.2 ms