Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 SNORD58.1-201ENST00000391313 66 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AL606517.2-201ENST00000442855 241 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 RPS27P1-201ENST00000450552 247 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 MIR4648-201ENST00000580107 72 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AL162424.1-201ENST00000602325 221 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AC022217.4-201ENST00000604389 163 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AL008718.3-201ENST00000610217 321 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AC134026.1-201ENST00000623249 2239 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 AC018630.2-201ENST00000534866 2403 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.82-201ENST00000363000 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.92-201ENST00000363043 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.122-201ENST00000363331 96 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-112P-201ENST00000363599 104 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.235-201ENST00000364412 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 U8.7-201ENST00000364940 136 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.306-201ENST00000365015 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.312-201ENST00000365089 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.322-201ENST00000365151 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-296P-201ENST00000384608 107 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 RNA5SP100-201ENST00000410903 110 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 RNA5SP59-201ENST00000410922 110 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 RPS4XP11-201ENST00000446897 772 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 SNORD2.1-201ENST00000458762 69 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.650-201ENST00000459002 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 RNU7-141P-201ENST00000459304 62 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 AC091021.1-201ENST00000468051 388 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 RPS29P11-201ENST00000496507 171 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 MRPS17P9-201ENST00000511924 393 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.777-201ENST00000516982 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 AC091544.4-201ENST00000555268 342 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 MIR4282-201ENST00000583613 67 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.771-201ENST00000598668 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 BX284668.6-201ENST00000606899 438 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.789-201ENST00000622480 102 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 MIR6079-201ENST00000635807 62 ntBASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.76-201ENST00000362931 109 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-379P-201ENST00000363813 104 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 SNORA63D-201ENST00000364359 132 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 SNORA20.1-201ENST00000364790 130 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-1323P-201ENST00000384025 107 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 MIR9-3-201ENST00000385084 90 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 BTF3P11-201ENST00000426582 477 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 HSPE1P21-201ENST00000438283 308 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 RNA5SP57-201ENST00000459463 123 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 RPS29P21-201ENST00000496272 170 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 RNU7-115P-201ENST00000516433 55 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-111P-201ENST00000517179 105 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 AP003357.1-201ENST00000604497 148 ntBASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.78□□□□□ -2.12
ZC3HC1Q86WB0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 RNU4-13P-201ENST00000364019 141 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 RNU6-338P-201ENST00000383888 105 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 RNU6-211P-201ENST00000384047 107 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 Y_RNA.489-201ENST00000384410 101 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 RNA5SP109-201ENST00000391010 116 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 MTCO2P33-201ENST00000402100 465 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 AC117454.1-201ENST00000491120 168 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 RNU6-1096P-201ENST00000517089 102 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 AC024405.2-202ENST00000532731 184 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 POLR3GP1-201ENST00000594073 261 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 AC013791.1-201ENST00000616619 62 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 MIR548AY-201ENST00000617669 107 ntBASIC1.77□□□□□ -2.13
ZC3HC1Q86WB0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 Y_RNA.65-201ENST00000362846 100 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 RNU6-899P-201ENST00000363947 107 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 Y_RNA.269-201ENST00000364685 89 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 Y_RNA.476-201ENST00000384347 108 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 Y_RNA.500-201ENST00000384466 111 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 Y_RNA.590-201ENST00000410140 107 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 AC009310.1-201ENST00000414414 451 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 AL445685.2-201ENST00000422551 342 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 RNU7-94P-201ENST00000459576 63 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 RPL23AP63-201ENST00000498752 471 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 RNU6-1291P-201ENST00000516591 104 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 RNU6-341P-201ENST00000516973 96 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 RNA5SP437-201ENST00000517249 129 ntBASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.76□□□□□ -2.13
ZC3HC1Q86WB0 AC022254.1-201ENST00000567857 235 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms