Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU2-54P-201ENST00000410299 190 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 Y_RNA.646-201ENST00000410980 101 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.82□□□□□ -2.28
NIPAL3Q6P499 AC093019.1-201ENST00000443135 252 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 RNU7-169P-201ENST00000459456 61 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 RNA5SP102-201ENST00000516865 106 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 AC090142.3-201ENST00000519012 385 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 AC022616.4-201ENST00000522985 181 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.82□□□□□ -2.28
NIPAL3Q6P499 AC055872.1-201ENST00000570978 278 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 AC005176.2-201ENST00000596933 147 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 U6atac.1-201ENST00000616025 117 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 AC240442.1-201ENST00000616055 283 ntBASIC0.82□□□□□ -2.28
NIPAL3Q6P499 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
NIPAL3Q6P499 Y_RNA.4-201ENST00000362333 112 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 Y_RNA.101-201ENST00000363154 102 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 RNU6-1188P-201ENST00000363795 107 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 U8.5-201ENST00000364528 136 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 RNY3P4-201ENST00000384428 101 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 SNORD78.2-201ENST00000391076 69 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 Y_RNA.605-201ENST00000410577 105 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 PRDX4P1-201ENST00000507189 574 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.81□□□□□ -2.28
NIPAL3Q6P499 MIR3192-201ENST00000584920 77 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 MIR4762-201ENST00000585261 75 ntBASIC0.81□□□□□ -2.28
NIPAL3Q6P499 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
NIPAL3Q6P499 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.81□□□□□ -2.28
NIPAL3Q6P499 Y_RNA.164-201ENST00000363709 102 ntBASIC0.8□□□□□ -2.28
NIPAL3Q6P499 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
NIPAL3Q6P499 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
NIPAL3Q6P499 RPS3AP1-201ENST00000413190 320 ntBASIC0.8□□□□□ -2.28
NIPAL3Q6P499 MLLT10P1-201ENST00000418346 262 ntBASIC0.8□□□□□ -2.28
NIPAL3Q6P499 RNU6-155P-201ENST00000516347 100 ntBASIC0.8□□□□□ -2.28
NIPAL3Q6P499 RNU6-113P-201ENST00000516653 101 ntBASIC0.8□□□□□ -2.28
NIPAL3Q6P499 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
NIPAL3Q6P499 RNU6-1084P-201ENST00000362498 107 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 RNU6-20P-201ENST00000384106 107 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 RNU6-890P-201ENST00000384121 107 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 MIR516B2-201ENST00000385190 85 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 MIR136-201ENST00000385207 82 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 MIR628-201ENST00000385229 95 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 RNU2-61P-201ENST00000411069 191 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 PDCL2P1-201ENST00000419302 352 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 CHEK2P4-201ENST00000450340 246 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 MTND4LP26-201ENST00000518144 282 ntBASIC0.79□□□□□ -2.28
NIPAL3Q6P499 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
NIPAL3Q6P499 MIR96-201ENST00000362288 78 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 RNA5SP264-201ENST00000363115 107 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 RNU6-626P-201ENST00000363354 107 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 MIR15B-201ENST00000385045 98 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 MT-TL1-201ENST00000386347 75 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.78□□□□□ -2.28
NIPAL3Q6P499 snoU13.25-201ENST00000458945 104 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 U8.19-201ENST00000459095 133 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 RNU6-470P-201ENST00000515954 104 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 RNU6-197P-201ENST00000516680 100 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.78□□□□□ -2.28
NIPAL3Q6P499 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 AC133104.2-201ENST00000615272 193 ntBASIC0.78□□□□□ -2.28
NIPAL3Q6P499 MIR103A2-201ENST00000362154 78 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 RNY3P11-201ENST00000364153 102 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.253-201ENST00000364562 112 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.314-201ENST00000365114 102 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 SNORD81.2-201ENST00000365153 76 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.330-201ENST00000365230 109 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 SNORD14.1-201ENST00000365609 90 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.446-201ENST00000384178 104 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 MIR520C-201ENST00000385005 87 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 RNU6-1304P-201ENST00000411374 106 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 FABP5P4-201ENST00000437203 171 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 RPL30P15-201ENST00000457129 321 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.653-201ENST00000459091 95 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 SNORD45.4-201ENST00000516629 73 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 SNORA74.3-201ENST00000517108 154 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 AC005972.2-201ENST00000604690 348 ntBASIC0.77□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.172-201ENST00000363765 102 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 MIR522-201ENST00000385071 87 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 SNORA25.10-201ENST00000515926 124 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 RNA5SP255-201ENST00000516370 107 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 RNU6-1012P-201ENST00000516606 109 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.714-201ENST00000517065 90 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 MIR4659A-201ENST00000580269 81 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 AC092794.1-201ENST00000612734 582 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 AC011476.5-201ENST00000615594 130 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 MIR8070-201ENST00000616510 88 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 U2.1-201ENST00000618978 145 ntBASIC0.76□□□□□ -2.29
NIPAL3Q6P499 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.230-201ENST00000364348 109 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.248-201ENST00000364501 109 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms