Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 RPS29P30-201ENST00000600975 111 ntBASIC1.52□□□□□ -2.17
CCDC30Q5VVM6 AL008636.1-201ENST00000625038 1018 ntBASIC1.52□□□□□ -2.17
CCDC30Q5VVM6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC30Q5VVM6 Y_RNA.112-201ENST00000363250 102 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 Y_RNA.431-201ENST00000384086 102 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 AC233266.1-201ENST00000454518 96 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 U8.19-201ENST00000459095 133 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 AC092991.1-201ENST00000477176 376 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 RNU6-63P-201ENST00000516690 95 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 AL133255.1-201ENST00000606374 441 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 AC242852.1-201ENST00000612151 96 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 AC104985.2-201ENST00000620598 500 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 AC244015.1-201ENST00000622301 99 ntBASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC30Q5VVM6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 RNU6-324P-201ENST00000363957 106 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 Y_RNA.579-201ENST00000390939 94 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 MTND4LP11-201ENST00000422184 280 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 RPS4XP11-201ENST00000446897 772 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 AC005042.3-201ENST00000453230 174 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 HMGN1P7-201ENST00000491722 313 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 RNU6-1170P-201ENST00000515974 106 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 AC090821.2-201ENST00000523552 176 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 AC090049.2-201ENST00000550377 109 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 MIR8065-201ENST00000620577 100 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 AC091895.1-201ENST00000624494 256 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 AC005592.1-201ENST00000566527 1640 ntBASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC30Q5VVM6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 MIRLET7C-201ENST00000362160 84 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 RNU6-1175P-201ENST00000365200 107 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 RNU6-136P-201ENST00000384663 107 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 RNU6-710P-201ENST00000410424 105 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 MCFD2P1-201ENST00000417812 300 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 RNU6-322P-201ENST00000516010 103 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 RN7SKP88-201ENST00000516847 250 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 AL117336.2-201ENST00000602435 335 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 SNORD58B-201ENST00000607313 66 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 7SK.8-201ENST00000612110 250 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 7SK.11-201ENST00000615477 250 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 7SK.13-201ENST00000622040 250 ntBASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC30Q5VVM6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 RNU4-41P-201ENST00000364426 143 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 SNORA2.2-201ENST00000365473 135 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 Y_RNA.395-201ENST00000383945 109 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 Y_RNA.458-201ENST00000384240 102 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 RNU6-1105P-201ENST00000384774 107 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 AC015922.2-201ENST00000435593 184 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 Z98949.2-201ENST00000440996 144 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 RNU7-12P-201ENST00000516030 62 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 MIR4778-201ENST00000577635 80 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 AL080274.1-201ENST00000605565 220 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 AC027279.3-201ENST00000625055 122 ntBASIC1.48□□□□□ -2.17
CCDC30Q5VVM6 SNORD63-201ENST00000384262 68 ntBASIC1.47□□□□□ -2.17
CCDC30Q5VVM6 RNY1P14-201ENST00000384426 108 ntBASIC1.47□□□□□ -2.17
CCDC30Q5VVM6 U8.20-201ENST00000459445 131 ntBASIC1.47□□□□□ -2.17
CCDC30Q5VVM6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC30Q5VVM6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 RNU6-833P-201ENST00000363486 107 ntBASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 RNU4-50P-201ENST00000364361 141 ntBASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.238-201ENST00000364441 102 ntBASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 SNORD116-13-201ENST00000384408 92 ntBASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 RNU6-966P-201ENST00000516479 104 ntBASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 AC005972.2-201ENST00000604690 348 ntBASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 AC004832.4-201ENST00000608952 331 ntBASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 AC106754.2-201ENST00000623006 233 ntBASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC30Q5VVM6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 U8.5-201ENST00000364528 136 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.329-201ENST00000365209 107 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 MIR1302-11-201ENST00000408051 138 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 MIR1302-9-201ENST00000408365 138 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 MIR1302-10-201ENST00000408734 138 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 AC024067.1-201ENST00000426199 223 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 CYCTP-201ENST00000504253 315 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 AC011604.1-201ENST00000545978 196 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 MIR4762-201ENST00000585261 75 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 AL357312.1-201ENST00000603879 298 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 MIR1302-2-201ENST00000607096 138 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 uc_338.22-201ENST00000622722 187 ntBASIC1.45□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.439-201ENST00000384119 94 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 AL451046.2-201ENST00000403074 277 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 RPEP5-201ENST00000441137 268 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.639-201ENST00000458981 102 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 RNU6-917P-201ENST00000516294 104 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 RNU6-922P-201ENST00000516753 99 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 RNU6-165P-201ENST00000517170 99 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 AC011373.1-201ENST00000607270 237 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 AC006157.1-201ENST00000611750 366 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms