Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.54□□□□□ -2
CCDC178Q5BJE1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 AC245047.8-201ENST00000456455 284 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.54□□□□□ -2
CCDC178Q5BJE1 RNU6-1007P-201ENST00000516586 107 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 SUMO2P18-201ENST00000518873 252 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 MIR4724-201ENST00000579485 89 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 MIR4648-201ENST00000580107 72 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 AC073413.2-201ENST00000604332 360 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.54□□□□□ -2
CCDC178Q5BJE1 MIR219B-201ENST00000637023 88 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC178Q5BJE1 snoU2_19.4-201ENST00000364329 80 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 Y_RNA.621-201ENST00000411065 96 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.53□□□□□ -2
CCDC178Q5BJE1 AC245102.2-201ENST00000448956 180 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.53□□□□□ -2
CCDC178Q5BJE1 Y_RNA.797-201ENST00000515977 94 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 CYCSP26-201ENST00000534107 320 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.53□□□□□ -2
CCDC178Q5BJE1 AP003357.1-201ENST00000604497 148 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 AL365434.2-201ENST00000607979 234 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 AC104465.1-201ENST00000611365 139 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 U6.73-201ENST00000619194 103 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 AP006437.1-201ENST00000641440 3685 ntBASIC2.53□□□□□ -2
CCDC178Q5BJE1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC178Q5BJE1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.53□□□□□ -2.01
CCDC178Q5BJE1 Y_RNA.8-201ENST00000362353 102 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 SNORA33-201ENST00000363664 130 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 RNA5SP493-201ENST00000364115 91 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 RNU6-117P-201ENST00000365415 107 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 MIR626-201ENST00000385032 94 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 RNU6-381P-201ENST00000391259 108 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 AL603908.1-201ENST00000406098 201 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 EBAG9P1-201ENST00000418955 543 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 AL162725.1-201ENST00000435405 301 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 AC127455.1-201ENST00000565496 145 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 AL031274.2-201ENST00000599419 203 ntBASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC178Q5BJE1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 AL596028.1-201ENST00000326971 197 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 RNU6-774P-201ENST00000363238 107 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 RNU6-1323P-201ENST00000384025 107 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 RNU1-41P-201ENST00000516161 162 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 RNU1-48P-201ENST00000516400 162 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 RNU6-453P-201ENST00000516819 85 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 RNU7-116P-201ENST00000516940 62 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 AC007229.1-201ENST00000590455 412 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 MIR338-201ENST00000636369 67 ntBASIC2.51□□□□□ -2.01
CCDC178Q5BJE1 ZNF355P-201ENST00000427301 3216 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 AC005336.3-201ENST00000623833 2679 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 RNU6-862P-201ENST00000362804 105 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 RNU6-144P-201ENST00000383951 107 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 Y_RNA.412-201ENST00000384001 104 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 RNU1-148P-201ENST00000384472 162 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 MT-TT-201ENST00000387460 66 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 MIR1278-201ENST00000408753 81 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 RPS4XP11-201ENST00000446897 772 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 AC233266.1-201ENST00000454518 96 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 RNU6-437P-201ENST00000459408 95 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 AC104435.1-201ENST00000483483 166 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 RN7SKP164-201ENST00000516138 266 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 AC242852.1-201ENST00000612151 96 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 AL359075.3-201ENST00000613288 217 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 AC244015.1-201ENST00000622301 99 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 U6.106-201ENST00000636360 105 ntBASIC2.5□□□□□ -2.01
CCDC178Q5BJE1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 RNU4-41P-201ENST00000364426 143 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 Y_RNA.240-201ENST00000364469 95 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 HMGN2P38-201ENST00000423806 265 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 RNU1-131P-201ENST00000458943 161 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 RPL36AP21-201ENST00000490372 323 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 RNU1-142P-201ENST00000516682 145 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 RNU6-1096P-201ENST00000517089 102 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 MRPS18CP4-201ENST00000535821 231 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 AL929325.1-201ENST00000603096 117 ntBASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC178Q5BJE1 RNU1-96P-201ENST00000364163 162 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 Y_RNA.229-201ENST00000364347 113 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 Y_RNA.267-201ENST00000364679 109 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 Y_RNA.435-201ENST00000384095 112 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 SNORA8-201ENST00000384574 139 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 MIR526A2-201ENST00000390198 65 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 MIR548M-201ENST00000408260 86 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 AL353689.1-201ENST00000438895 199 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 AC091021.1-201ENST00000468051 388 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 SCARNA8-201ENST00000515924 131 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 RNU6-1291P-201ENST00000516591 104 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms