Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 Y_RNA.217-201ENST00000364214 105 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 U8.7-201ENST00000364940 136 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-763P-201ENST00000390865 106 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-360P-201ENST00000390944 104 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 AC233266.1-201ENST00000454518 96 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.641-201ENST00000459414 105 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 AC099513.1-201ENST00000490423 301 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 MRPS17P9-201ENST00000511924 393 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 SNORA27.4-201ENST00000516650 95 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 AP002004.2-201ENST00000531656 154 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 AC011604.1-201ENST00000545978 196 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 AC012433.1-201ENST00000588916 398 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 AP003357.1-201ENST00000604497 148 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 AC242852.1-201ENST00000612151 96 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 U2.14-201ENST00000615943 113 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 AC244015.1-201ENST00000622301 99 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.288-201ENST00000364854 92 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 SNORA72-201ENST00000384339 132 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-463P-201ENST00000384340 107 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.556-201ENST00000384677 113 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 MIR562-201ENST00000384894 95 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 RNU2-2P-201ENST00000410396 191 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 RN7SKP223-201ENST00000410582 62 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 COX6CP10-201ENST00000416832 224 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 AL356320.1-201ENST00000429616 163 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 SNORD127-201ENST00000458892 86 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 RNU7-141P-201ENST00000459304 62 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 RNU7-34P-201ENST00000459394 64 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.637-201ENST00000459424 114 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 AC117454.1-201ENST00000491120 168 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 RNU7-115P-201ENST00000516433 55 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 RNU2-56P-201ENST00000516826 190 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 AC024405.2-202ENST00000532731 184 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 MIR4709-201ENST00000577272 72 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 AL078604.3-201ENST00000615580 211 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 MIR548AY-201ENST00000617669 107 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 7SK.10-201ENST00000621414 298 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 MIR219B-201ENST00000637023 88 ntBASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RUNDC3AQ59EK9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 AC134026.1-201ENST00000623249 2239 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.275-201ENST00000364726 110 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-950P-201ENST00000384651 107 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 STAG3L5P-204ENST00000443759 179 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 AL358944.1-201ENST00000528537 144 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 AC127455.1-201ENST00000565496 145 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 POLR3GP1-201ENST00000594073 261 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 AC021506.2-201ENST00000612354 169 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 U4.1-201ENST00000620349 87 ntBASIC1.81□□□□□ -2.12
RUNDC3AQ59EK9 AC068700.1-201ENST00000565862 3754 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.44-201ENST00000362676 108 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.193-201ENST00000363979 102 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.452-201ENST00000384202 108 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 SNORA70B-201ENST00000384210 135 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.562-201ENST00000384695 113 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 RN7SKP200-201ENST00000410564 320 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 U8.19-201ENST00000459095 133 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 RN7SL429P-201ENST00000479090 223 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 RN7SL489P-201ENST00000486185 223 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 RN7SL327P-201ENST00000488659 223 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 RNU7-116P-201ENST00000516940 62 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 MIR1273D-201ENST00000577266 86 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 RN7SL853P-201ENST00000617250 223 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 AC095038.3-201ENST00000634439 195 ntBASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.8□□□□□ -2.12
RUNDC3AQ59EK9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.14-201ENST00000362415 103 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.117-201ENST00000363294 101 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-203P-201ENST00000384038 104 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 MTCO2P33-201ENST00000402100 465 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 BTF3P11-201ENST00000426582 477 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-1132P-201ENST00000459214 107 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 OR9P1P-201ENST00000496431 281 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 MIR3149-201ENST00000584629 83 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 AC005357.1-201ENST00000588399 301 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 AL008718.3-201ENST00000610217 321 ntBASIC1.79□□□□□ -2.12
RUNDC3AQ59EK9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-740P-201ENST00000364734 105 ntBASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-702P-201ENST00000364982 107 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms