Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 Y_RNA.679-201ENST00000516416 91 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.700-201ENST00000516806 100 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 MIR3169-201ENST00000578032 83 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 AL008718.3-201ENST00000610217 321 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 AC073349.3-201ENST00000617616 186 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.83-201ENST00000363005 113 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.785-201ENST00000384290 109 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 SNORA26.5-201ENST00000391215 123 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 RNU6-855P-201ENST00000410395 104 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 AL445685.2-201ENST00000422551 342 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 RPL31P63-201ENST00000422565 375 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 BTF3P11-201ENST00000426582 477 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 HSPE1P21-201ENST00000438283 308 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 Z98949.2-201ENST00000440996 144 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 AC011406.1-201ENST00000512440 370 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 RNU1-41P-201ENST00000516161 162 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 RNU1-48P-201ENST00000516400 162 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 AC027419.1-201ENST00000522976 328 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 AC022254.1-201ENST00000567857 235 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.59□□□□□ -2.15
SNAI3Q3KNW1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 RNU1-96P-201ENST00000364163 162 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 Y_RNA.297-201ENST00000364950 91 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 Y_RNA.304-201ENST00000365011 112 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 RNU6-407P-201ENST00000365280 104 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 RNU6-117P-201ENST00000365415 107 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 SNORA72.4-201ENST00000384174 132 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 SNORA48.1-201ENST00000390879 135 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 AC019129.1-201ENST00000403786 261 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 RPS20P10-201ENST00000451209 253 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 RPL36AP21-201ENST00000490372 323 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 RPS29P11-201ENST00000496507 171 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 MIR4513-201ENST00000581077 86 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 AL365265.1-201ENST00000621045 234 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.58□□□□□ -2.16
SNAI3Q3KNW1 AC068700.1-201ENST00000565862 3754 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 AL356292.1-201ENST00000283110 373 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 MIR411-201ENST00000362239 96 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 RNU1-22P-201ENST00000363334 158 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 RNU6-1048P-201ENST00000364054 107 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 SNORD116-13-201ENST00000384408 92 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 AL117342.1-201ENST00000404861 406 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 OOSP1P1-201ENST00000423265 274 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 HMGN2P34-201ENST00000437647 269 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 RPS27P22-201ENST00000478056 241 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 SNORA81.3-201ENST00000517283 198 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 MIR4419B-201ENST00000577260 68 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 MIR5692C2-201ENST00000577959 77 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 AC004832.4-201ENST00000608952 331 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 AL353149.1-201ENST00000610667 244 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 AC013791.1-201ENST00000616619 62 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 U6.73-201ENST00000619194 103 ntBASIC1.57□□□□□ -2.16
SNAI3Q3KNW1 Y_RNA.29-201ENST00000362570 113 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 RNU6-653P-201ENST00000363074 106 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 RNU6-899P-201ENST00000363947 107 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 MIR9-3-201ENST00000385084 90 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 MIR1253-201ENST00000408273 105 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 RNA5SP100-201ENST00000410903 110 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 RNA5SP59-201ENST00000410922 110 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 AC009310.1-201ENST00000414414 451 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 AC010154.1-201ENST00000425857 269 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 AC104332.1-201ENST00000440471 797 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 AL138752.1-201ENST00000452964 351 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 RNU7-141P-201ENST00000459304 62 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 AC097462.1-201ENST00000514125 324 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 RNU6-63P-201ENST00000516690 95 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 AL137100.2-201ENST00000555786 315 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 MIR4438-201ENST00000585271 93 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 MIR338-201ENST00000636369 67 ntBASIC1.56□□□□□ -2.16
SNAI3Q3KNW1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 SNORD114-1-201ENST00000362705 72 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 U8.7-201ENST00000364940 136 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 RNU6-417P-201ENST00000384712 107 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 MTCO2P33-201ENST00000402100 465 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 RNA5SP511-201ENST00000410487 115 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms