Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 MIR6844-201ENST00000637122 62 ntBASIC2.38□□□□□ -2.03
ROM1Q03395 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ROM1Q03395 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
ROM1Q03395 Y_RNA.634-201ENST00000364811 113 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 Y_RNA.486-201ENST00000384398 107 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 MIR513C-201ENST00000401352 84 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 RNA5SP21-201ENST00000410917 96 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 AC245047.4-201ENST00000433189 144 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 AC107083.1-201ENST00000439643 279 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.37□□□□□ -2.03
ROM1Q03395 MRPS17P9-201ENST00000511924 393 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 RNVU1-2-201ENST00000516326 135 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 AC112693.2-201ENST00000556538 232 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 CTSLP2-204ENST00000629029 392 ntBASIC2.37□□□□□ -2.03
ROM1Q03395 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.37□□□□□ -2.03
ROM1Q03395 SNORD68-201ENST00000363214 84 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RNU6-978P-201ENST00000364371 103 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RNU6-1019P-201ENST00000364424 107 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RNU6-1138P-201ENST00000365359 106 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RNU6-1336P-201ENST00000383886 109 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 SNORD72-201ENST00000390994 80 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RNA5SP465-201ENST00000391195 109 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 AL138827.1-201ENST00000402666 306 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RNA5SP270-201ENST00000411361 118 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.36□□□□□ -2.03
ROM1Q03395 EEF1A1P41-201ENST00000414667 207 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RNA5SP153-201ENST00000516498 76 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RNU6-826P-201ENST00000516827 104 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 AL160236.1-201ENST00000556317 195 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.36□□□□□ -2.03
ROM1Q03395 AC091895.1-201ENST00000624494 256 ntBASIC2.36□□□□□ -2.03
ROM1Q03395 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ROM1Q03395 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
ROM1Q03395 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ROM1Q03395 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ROM1Q03395 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
ROM1Q03395 VTRNA1-1-201ENST00000363120 99 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 SNORA20-201ENST00000384662 132 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 MIR522-201ENST00000385071 87 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 RNU6-588P-201ENST00000410281 105 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 RPL30P13-201ENST00000418873 348 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 AL606753.1-201ENST00000427435 87 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 RNA5SP341-201ENST00000516261 117 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 MIR3646-201ENST00000578301 84 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 MIR4662B-201ENST00000579498 81 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 MIR3670-2-201ENST00000582974 65 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 MIR3670-1-201ENST00000584160 65 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 MIR3670-3-201ENST00000584855 65 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 MIR3670-4-201ENST00000612260 65 ntBASIC2.35□□□□□ -2.03
ROM1Q03395 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.34□□□□□ -2.03
ROM1Q03395 RNY1P11-201ENST00000363759 113 ntBASIC2.34□□□□□ -2.03
ROM1Q03395 RNU6-1082P-201ENST00000364574 107 ntBASIC2.34□□□□□ -2.03
ROM1Q03395 RNU6-257P-201ENST00000410238 98 ntBASIC2.34□□□□□ -2.03
ROM1Q03395 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
ROM1Q03395 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.34□□□□□ -2.03
ROM1Q03395 AC004486.1-201ENST00000546846 233 ntBASIC2.34□□□□□ -2.03
ROM1Q03395 MIR4325-201ENST00000583049 90 ntBASIC2.34□□□□□ -2.03
ROM1Q03395 MIR4635-201ENST00000583759 79 ntBASIC2.34□□□□□ -2.03
ROM1Q03395 AC008507.4-201ENST00000585464 127 ntBASIC2.34□□□□□ -2.03
ROM1Q03395 AC097639.2-201ENST00000603159 172 ntBASIC2.34□□□□□ -2.03
ROM1Q03395 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.34□□□□□ -2.03
ROM1Q03395 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ROM1Q03395 AP006437.1-201ENST00000641440 3685 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ROM1Q03395 AC010332.2-201ENST00000613083 1904 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 Y_RNA.265-201ENST00000364677 108 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 RNU6-597P-201ENST00000365620 102 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 RNU1-52P-201ENST00000384190 164 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 MIR9-1-201ENST00000385198 89 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 RNU6-440P-201ENST00000390882 105 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 SNORA75.5-201ENST00000391291 81 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 AC092017.2-201ENST00000427600 362 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 STAG3L5P-204ENST00000443759 179 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 RNU7-197P-201ENST00000458836 62 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 AC092991.1-201ENST00000477176 376 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.33□□□□□ -2.04
ROM1Q03395 Y_RNA.714-201ENST00000517065 90 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 MIR5092-201ENST00000583139 88 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 MIR8054-201ENST00000620877 86 ntBASIC2.33□□□□□ -2.04
ROM1Q03395 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ROM1Q03395 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.33□□□□□ -2.04
ROM1Q03395 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.33□□□□□ -2.04
ROM1Q03395 SNORA48.1-201ENST00000390879 135 ntBASIC2.32□□□□□ -2.04
ROM1Q03395 Y_RNA.586-201ENST00000391146 98 ntBASIC2.32□□□□□ -2.04
ROM1Q03395 SNORA26-201ENST00000391286 122 ntBASIC2.32□□□□□ -2.04
ROM1Q03395 RNA5SP501-201ENST00000410990 112 ntBASIC2.32□□□□□ -2.04
ROM1Q03395 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.32□□□□□ -2.04
ROM1Q03395 FTH1P12-201ENST00000432137 551 ntBASIC2.32□□□□□ -2.04
ROM1Q03395 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.32□□□□□ -2.04
ROM1Q03395 SNORA31.10-201ENST00000516482 106 ntBASIC2.32□□□□□ -2.04
ROM1Q03395 RNU6-365P-201ENST00000517113 106 ntBASIC2.32□□□□□ -2.04
ROM1Q03395 AC091544.4-201ENST00000555268 342 ntBASIC2.32□□□□□ -2.04
ROM1Q03395 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.32□□□□□ -2.04
ROM1Q03395 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.32□□□□□ -2.04
ROM1Q03395 SNORA25.7-201ENST00000364375 127 ntBASIC2.31□□□□□ -2.04
ROM1Q03395 RNU1-112P-201ENST00000364401 164 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms