Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.81□□□□□ -2.54
LSM3P62310 POLR2KP2-201ENST00000438155 177 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 MTCO1P29-201ENST00000496868 288 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 SNORA31.14-201ENST00000516728 116 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 AP002963.1-201ENST00000530590 184 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 MIR3925-201ENST00000584674 77 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 AC005828.6-201ENST00000606610 232 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 Pinc.1-201ENST00000616452 154 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 MIR8066-201ENST00000617280 78 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.81□□□□□ -2.54
LSM3P62310 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.81□□□□□ -2.54
LSM3P62310 RNU6-454P-201ENST00000364292 107 ntBASIC-0.82□□□□□ -2.54
LSM3P62310 SNORD38C-201ENST00000384381 69 ntBASIC-0.82□□□□□ -2.54
LSM3P62310 RNU6-933P-201ENST00000384424 107 ntBASIC-0.82□□□□□ -2.54
LSM3P62310 MIR588-201ENST00000384900 83 ntBASIC-0.82□□□□□ -2.54
LSM3P62310 AC133104.1-201ENST00000429100 218 ntBASIC-0.82□□□□□ -2.54
LSM3P62310 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.82□□□□□ -2.54
LSM3P62310 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.82□□□□□ -2.54
LSM3P62310 MIR3684-201ENST00000579779 74 ntBASIC-0.82□□□□□ -2.54
LSM3P62310 MIR5692C1-201ENST00000585309 91 ntBASIC-0.82□□□□□ -2.54
LSM3P62310 AC121247.2-201ENST00000604776 136 ntBASIC-0.82□□□□□ -2.54
LSM3P62310 AC022306.2-201ENST00000617563 647 ntBASIC-0.82□□□□□ -2.54
LSM3P62310 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.83□□□□□ -2.54
LSM3P62310 RNY1-201ENST00000364228 113 ntBASIC-0.83□□□□□ -2.54
LSM3P62310 RNU6-284P-201ENST00000411105 106 ntBASIC-0.83□□□□□ -2.54
LSM3P62310 MTATP6P14-201ENST00000455189 673 ntBASIC-0.83□□□□□ -2.54
LSM3P62310 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.83□□□□□ -2.54
LSM3P62310 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.83□□□□□ -2.54
LSM3P62310 AL022161.1-201ENST00000604390 213 ntBASIC-0.83□□□□□ -2.54
LSM3P62310 MIR7844-201ENST00000616161 122 ntBASIC-0.83□□□□□ -2.54
LSM3P62310 FTX_2.1-201ENST00000618816 94 ntBASIC-0.83□□□□□ -2.54
LSM3P62310 SNORD114-11-201ENST00000363738 75 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 SNORD28-201ENST00000384706 75 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 RNY3P9-201ENST00000384727 106 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 AC026782.1-201ENST00000512952 449 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 RNU2-13P-201ENST00000515909 113 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 RNU6-189P-201ENST00000516120 101 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 AP003168.1-201ENST00000530091 307 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 MIR548AD-201ENST00000584780 82 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 AL133215.3-201ENST00000609801 448 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 SNORA70.25-201ENST00000612741 95 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 AL158063.1-201ENST00000615349 536 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 MIR548AZ-201ENST00000616567 95 ntBASIC-0.84□□□□□ -2.54
LSM3P62310 SNORD14E-201ENST00000364009 85 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 SNORA63C-201ENST00000364578 129 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 RNU6-740P-201ENST00000364734 105 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 RNU6-480P-201ENST00000384332 107 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 RNU6-517P-201ENST00000384362 110 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.85□□□□□ -2.55
LSM3P62310 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.85□□□□□ -2.55
LSM3P62310 AC105029.1-201ENST00000520250 669 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 MTND4P7-201ENST00000523876 130 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 MIR3682-201ENST00000581338 84 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 MIR8064-201ENST00000612863 90 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 AC009161.2-201ENST00000624626 138 ntBASIC-0.85□□□□□ -2.55
LSM3P62310 RNU6-181P-201ENST00000363225 107 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 SNORD114-28-201ENST00000363610 72 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.86□□□□□ -2.55
LSM3P62310 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 RPL21P38-201ENST00000418090 167 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 Z99497.1-201ENST00000421282 135 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 SNRPGP14-201ENST00000435400 219 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 RNU7-187P-201ENST00000458985 68 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 AC114755.3-201ENST00000481111 251 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 MTND2P31-201ENST00000512602 616 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 RNU6-830P-201ENST00000516353 107 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 RNU6-445P-201ENST00000516949 107 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 AL118558.2-201ENST00000556294 238 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 AC092747.3-201ENST00000603769 301 ntBASIC-0.86□□□□□ -2.55
LSM3P62310 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 RNU6-281P-201ENST00000384212 103 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 SNORA32.3-201ENST00000384772 121 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 MIR215-201ENST00000384858 110 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 BX295541.1-201ENST00000417774 250 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.87□□□□□ -2.55
LSM3P62310 UQCRBP2-201ENST00000447827 297 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 TPTE2P5-203ENST00000458118 728 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 RNA5SP330-201ENST00000517096 96 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 AC093023.1-201ENST00000547375 507 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 MIR4424-201ENST00000585257 86 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 AC008536.2-201ENST00000607284 349 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 AC103705.1-201ENST00000619013 241 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 AC244669.1-204ENST00000621564 178 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 uc_338.36-201ENST00000622331 158 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 AL162726.3-218ENST00000636401 95 ntBASIC-0.87□□□□□ -2.55
LSM3P62310 RNU6-847P-201ENST00000411115 108 ntBASIC-0.88□□□□□ -2.55
LSM3P62310 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.88□□□□□ -2.55
LSM3P62310 AC236972.2-201ENST00000434979 310 ntBASIC-0.88□□□□□ -2.55
LSM3P62310 MTATP6P26-201ENST00000445926 662 ntBASIC-0.88□□□□□ -2.55
LSM3P62310 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms