Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 Y_RNA.693-201ENST00000516641 110 ntBASIC0.08□□□□□ -2.4
ACTBP60709 MIR2115-201ENST00000516657 100 ntBASIC0.08□□□□□ -2.4
ACTBP60709 Y_RNA.706-201ENST00000516933 99 ntBASIC0.08□□□□□ -2.4
ACTBP60709 AC093027.1-201ENST00000546698 429 ntBASIC0.08□□□□□ -2.4
ACTBP60709 AL355375.2-201ENST00000574825 175 ntBASIC0.08□□□□□ -2.4
ACTBP60709 AC104260.1-201ENST00000616660 539 ntBASIC0.08□□□□□ -2.4
ACTBP60709 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.08□□□□□ -2.4
ACTBP60709 MIR377-201ENST00000362145 69 ntBASIC0.07□□□□□ -2.4
ACTBP60709 RNU6-1252P-201ENST00000363054 104 ntBASIC0.07□□□□□ -2.4
ACTBP60709 RNU6-1085P-201ENST00000363576 107 ntBASIC0.07□□□□□ -2.4
ACTBP60709 DLGAP5P1-201ENST00000430307 464 ntBASIC0.07□□□□□ -2.4
ACTBP60709 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.07□□□□□ -2.4
ACTBP60709 SNORD45.4-201ENST00000516629 73 ntBASIC0.07□□□□□ -2.4
ACTBP60709 AC145350.1-201ENST00000567426 208 ntBASIC0.07□□□□□ -2.4
ACTBP60709 AC010525.2-201ENST00000590920 195 ntBASIC0.07□□□□□ -2.4
ACTBP60709 RBM11P1-201ENST00000604951 799 ntBASIC0.07□□□□□ -2.4
ACTBP60709 MIR3674-201ENST00000636576 68 ntBASIC0.07□□□□□ -2.4
ACTBP60709 Y_RNA.253-201ENST00000364562 112 ntBASIC0.06□□□□□ -2.4
ACTBP60709 Y_RNA.256-201ENST00000364594 104 ntBASIC0.06□□□□□ -2.4
ACTBP60709 MT-TN-201ENST00000387400 73 ntBASIC0.06□□□□□ -2.4
ACTBP60709 Y_RNA.615-201ENST00000410769 117 ntBASIC0.06□□□□□ -2.4
ACTBP60709 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.06□□□□□ -2.4
ACTBP60709 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.06□□□□□ -2.4
ACTBP60709 SEPT14P3-201ENST00000439401 183 ntBASIC0.06□□□□□ -2.4
ACTBP60709 MTND1P26-201ENST00000440488 538 ntBASIC0.06□□□□□ -2.4
ACTBP60709 HMGN2P32-201ENST00000444648 269 ntBASIC0.06□□□□□ -2.4
ACTBP60709 AL732372.2-207ENST00000445840 183 ntBASIC0.06□□□□□ -2.4
ACTBP60709 SNRPGP12-201ENST00000449481 213 ntBASIC0.06□□□□□ -2.4
ACTBP60709 SEPT14P2-201ENST00000453405 183 ntBASIC0.06□□□□□ -2.4
ACTBP60709 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.06□□□□□ -2.4
ACTBP60709 AC010486.3-201ENST00000511602 785 ntBASIC0.06□□□□□ -2.4
ACTBP60709 SEPT14P4-201ENST00000513445 186 ntBASIC0.06□□□□□ -2.4
ACTBP60709 SNORA25.10-201ENST00000515926 124 ntBASIC0.06□□□□□ -2.4
ACTBP60709 FO082796.1-201ENST00000523795 183 ntBASIC0.06□□□□□ -2.4
ACTBP60709 MIR5701-3-201ENST00000578890 82 ntBASIC0.06□□□□□ -2.4
ACTBP60709 MIR3612-201ENST00000579753 87 ntBASIC0.06□□□□□ -2.4
ACTBP60709 MIR5701-1-201ENST00000585138 82 ntBASIC0.06□□□□□ -2.4
ACTBP60709 MIR5701-2-201ENST00000615634 82 ntBASIC0.06□□□□□ -2.4
ACTBP60709 AC078938.1-201ENST00000620993 318 ntBASIC0.06□□□□□ -2.4
ACTBP60709 AC092634.7-201ENST00000621022 103 ntBASIC0.06□□□□□ -2.4
ACTBP60709 AC023510.2-201ENST00000622162 746 ntBASIC0.06□□□□□ -2.4
ACTBP60709 Y_RNA.373-201ENST00000365600 103 ntBASIC0.05□□□□□ -2.4
ACTBP60709 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
ACTBP60709 SNORD116-11-201ENST00000383882 92 ntBASIC0.05□□□□□ -2.4
ACTBP60709 Y_RNA.553-201ENST00000384670 102 ntBASIC0.05□□□□□ -2.4
ACTBP60709 MIR518A1-201ENST00000385068 85 ntBASIC0.05□□□□□ -2.4
ACTBP60709 MIR520H-201ENST00000385126 88 ntBASIC0.05□□□□□ -2.4
ACTBP60709 AL390729.2-201ENST00000416137 156 ntBASIC0.05□□□□□ -2.4
ACTBP60709 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.05□□□□□ -2.4
ACTBP60709 RNU6-1337P-201ENST00000516525 95 ntBASIC0.05□□□□□ -2.4
ACTBP60709 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.05□□□□□ -2.4
ACTBP60709 MIR6718-201ENST00000616153 80 ntBASIC0.05□□□□□ -2.4
ACTBP60709 AL359880.1-201ENST00000621879 266 ntBASIC0.05□□□□□ -2.4
ACTBP60709 Y_RNA.498-201ENST00000384460 102 ntBASIC0.04□□□□□ -2.4
ACTBP60709 RNU6-306P-201ENST00000384617 107 ntBASIC0.04□□□□□ -2.4
ACTBP60709 SNORD28B-201ENST00000390993 75 ntBASIC0.04□□□□□ -2.4
ACTBP60709 RNU6-908P-201ENST00000410160 94 ntBASIC0.04□□□□□ -2.4
ACTBP60709 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.04□□□□□ -2.4
ACTBP60709 RNU6-625P-201ENST00000459412 107 ntBASIC0.04□□□□□ -2.4
ACTBP60709 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.04□□□□□ -2.4
ACTBP60709 AC022616.4-201ENST00000522985 181 ntBASIC0.04□□□□□ -2.4
ACTBP60709 AC022523.2-201ENST00000561045 150 ntBASIC0.04□□□□□ -2.4
ACTBP60709 MIR548AR-201ENST00000582191 57 ntBASIC0.04□□□□□ -2.4
ACTBP60709 MIR4273-201ENST00000582824 84 ntBASIC0.04□□□□□ -2.4
ACTBP60709 AC121247.2-201ENST00000604776 136 ntBASIC0.04□□□□□ -2.4
ACTBP60709 AL162730.1-201ENST00000605734 292 ntBASIC0.04□□□□□ -2.4
ACTBP60709 DISC2.1-201ENST00000612827 205 ntBASIC0.04□□□□□ -2.4
ACTBP60709 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.04□□□□□ -2.4
ACTBP60709 MIR6863-201ENST00000636112 90 ntBASIC0.04□□□□□ -2.4
ACTBP60709 SNORD45.3-201ENST00000363836 72 ntBASIC0.03□□□□□ -2.4
ACTBP60709 SNORD115-30-201ENST00000364117 82 ntBASIC0.03□□□□□ -2.4
ACTBP60709 snoU2-30.1-201ENST00000365012 70 ntBASIC0.03□□□□□ -2.4
ACTBP60709 Y_RNA.376-201ENST00000365638 108 ntBASIC0.03□□□□□ -2.4
ACTBP60709 Y_RNA.414-201ENST00000384011 101 ntBASIC0.03□□□□□ -2.4
ACTBP60709 MTCO3P40-201ENST00000392516 676 ntBASIC0.03□□□□□ -2.4
ACTBP60709 Y_RNA.621-201ENST00000411065 96 ntBASIC0.03□□□□□ -2.4
ACTBP60709 RNU6-329P-201ENST00000459618 107 ntBASIC0.03□□□□□ -2.4
ACTBP60709 RNU2-12P-201ENST00000517216 168 ntBASIC0.03□□□□□ -2.4
ACTBP60709 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
ACTBP60709 MTND5P26-201ENST00000426018 1752 ntBASIC0.02□□□□□ -2.41
ACTBP60709 RNA5SP62-201ENST00000363457 110 ntBASIC0.02□□□□□ -2.41
ACTBP60709 RNA5SP517-201ENST00000364724 117 ntBASIC0.02□□□□□ -2.41
ACTBP60709 SNORD50B-201ENST00000364995 70 ntBASIC0.02□□□□□ -2.41
ACTBP60709 RNU6-396P-201ENST00000365369 105 ntBASIC0.02□□□□□ -2.41
ACTBP60709 Y_RNA.359-201ENST00000365498 102 ntBASIC0.02□□□□□ -2.41
ACTBP60709 Y_RNA.364-201ENST00000365532 101 ntBASIC0.02□□□□□ -2.41
ACTBP60709 MIR190B-201ENST00000401119 79 ntBASIC0.02□□□□□ -2.41
ACTBP60709 RNA5SP475-201ENST00000410568 110 ntBASIC0.02□□□□□ -2.41
ACTBP60709 SNORA40.8-201ENST00000411034 126 ntBASIC0.02□□□□□ -2.41
ACTBP60709 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.02□□□□□ -2.41
ACTBP60709 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.02□□□□□ -2.41
ACTBP60709 snoU13.21-201ENST00000459368 105 ntBASIC0.02□□□□□ -2.41
ACTBP60709 NDUFA4P2-201ENST00000489989 244 ntBASIC0.02□□□□□ -2.41
ACTBP60709 RNU6-863P-201ENST00000515989 104 ntBASIC0.02□□□□□ -2.41
ACTBP60709 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.02□□□□□ -2.41
ACTBP60709 MIR4760-201ENST00000585040 80 ntBASIC0.02□□□□□ -2.41
ACTBP60709 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
ACTBP60709 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
ACTBP60709 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
ACTBP60709 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms