Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 Y_RNA.621-201ENST00000411065 96 ntBASIC1.8□□□□□ -2.12
RHBDL3P58872 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.8□□□□□ -2.12
RHBDL3P58872 AC040926.1-201ENST00000530195 238 ntBASIC1.8□□□□□ -2.12
RHBDL3P58872 AL512310.8-201ENST00000550183 120 ntBASIC1.8□□□□□ -2.12
RHBDL3P58872 AC005592.1-201ENST00000566527 1640 ntBASIC1.8□□□□□ -2.12
RHBDL3P58872 MIR337-201ENST00000362281 93 ntBASIC1.79□□□□□ -2.12
RHBDL3P58872 Y_RNA.471-201ENST00000384312 102 ntBASIC1.79□□□□□ -2.12
RHBDL3P58872 Y_RNA.509-201ENST00000384506 99 ntBASIC1.79□□□□□ -2.12
RHBDL3P58872 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.79□□□□□ -2.12
RHBDL3P58872 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.79□□□□□ -2.12
RHBDL3P58872 SNORA25.10-201ENST00000515926 124 ntBASIC1.79□□□□□ -2.12
RHBDL3P58872 RNU7-110P-201ENST00000516891 62 ntBASIC1.79□□□□□ -2.12
RHBDL3P58872 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.79□□□□□ -2.12
RHBDL3P58872 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.79□□□□□ -2.12
RHBDL3P58872 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.79□□□□□ -2.12
RHBDL3P58872 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RHBDL3P58872 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.79□□□□□ -2.12
RHBDL3P58872 SNORD42.2-201ENST00000365570 69 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 RNU6-21P-201ENST00000384710 107 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 CALM2P4-201ENST00000430810 426 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 RNU1-98P-201ENST00000458992 160 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 RNU7-12P-201ENST00000516030 62 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 SNORA31.24-201ENST00000517232 57 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 AC005972.2-201ENST00000604690 348 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 MIR8065-201ENST00000620577 100 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 AL160413.1-201ENST00000622780 310 ntBASIC1.78□□□□□ -2.12
RHBDL3P58872 Y_RNA.445-201ENST00000384168 102 ntBASIC1.77□□□□□ -2.13
RHBDL3P58872 Y_RNA.551-201ENST00000384661 102 ntBASIC1.77□□□□□ -2.13
RHBDL3P58872 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RHBDL3P58872 U8.16-201ENST00000391279 133 ntBASIC1.77□□□□□ -2.13
RHBDL3P58872 AL354695.1-201ENST00000427935 228 ntBASIC1.77□□□□□ -2.13
RHBDL3P58872 RPS4XP11-201ENST00000446897 772 ntBASIC1.77□□□□□ -2.13
RHBDL3P58872 MIR4421-201ENST00000578133 69 ntBASIC1.77□□□□□ -2.13
RHBDL3P58872 MIR3664-201ENST00000579074 99 ntBASIC1.77□□□□□ -2.13
RHBDL3P58872 C8orf59P2-201ENST00000603441 271 ntBASIC1.77□□□□□ -2.13
RHBDL3P58872 AL050343.2-201ENST00000607338 280 ntBASIC1.77□□□□□ -2.13
RHBDL3P58872 Y_RNA.80-201ENST00000362996 102 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 Y_RNA.329-201ENST00000365209 107 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 RNU6-855P-201ENST00000410395 104 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 RPEP5-201ENST00000441137 268 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 CYCTP-201ENST00000504253 315 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 RN7SKP88-201ENST00000516847 250 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 Y_RNA.721-201ENST00000517207 102 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 MIR4778-201ENST00000577635 80 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 7SK.8-201ENST00000612110 250 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 7SK.11-201ENST00000615477 250 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 MIR8070-201ENST00000616510 88 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 7SK.13-201ENST00000622040 250 ntBASIC1.76□□□□□ -2.13
RHBDL3P58872 MIR369-201ENST00000362155 70 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 RNU6-1248P-201ENST00000391096 64 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 MIR1287-201ENST00000408492 90 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.75□□□□□ -2.13
RHBDL3P58872 MTND1P14-201ENST00000427400 950 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 MTND4P19-201ENST00000446659 478 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 AC009474.2-201ENST00000451383 136 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 RNU7-116P-201ENST00000516940 62 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 Y_RNA.714-201ENST00000517065 90 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 AC011604.1-201ENST00000545978 196 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 AC090049.2-201ENST00000550377 109 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 AL357312.1-201ENST00000603879 298 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 AC004832.4-201ENST00000608952 331 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 AC007485.1-201ENST00000616755 206 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 AC027279.3-201ENST00000625055 122 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 ZNF209P-201ENST00000593450 2304 ntBASIC1.75□□□□□ -2.13
RHBDL3P58872 RNU4-41P-201ENST00000364426 143 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 SNORA2.2-201ENST00000365473 135 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 SNORD26-201ENST00000384147 75 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 SNORA72-201ENST00000384339 132 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 MIR891A-201ENST00000401237 79 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 AL451046.2-201ENST00000403074 277 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 MIR1304-201ENST00000408243 91 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 RPS20P10-201ENST00000451209 253 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 AC092991.1-201ENST00000477176 376 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 RNU6-988P-201ENST00000519081 107 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.74□□□□□ -2.13
RHBDL3P58872 AC106754.2-201ENST00000623006 233 ntBASIC1.74□□□□□ -2.13
RHBDL3P58872 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RHBDL3P58872 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.73□□□□□ -2.13
RHBDL3P58872 AL391987.6-201ENST00000305671 199 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 RNU6-833P-201ENST00000363486 107 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 SNORA7.1-201ENST00000363750 139 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 RNU6-392P-201ENST00000364926 101 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 Y_RNA.327-201ENST00000365201 102 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 Y_RNA.419-201ENST00000384041 102 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 Y_RNA.456-201ENST00000384232 111 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 SNORD116-13-201ENST00000384408 92 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 MIR653-201ENST00000385279 96 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 SEPT14P8-201ENST00000508026 178 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 CYP3A52P-201ENST00000563326 91 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 SNORD113-5-201ENST00000607261 78 ntBASIC1.73□□□□□ -2.13
RHBDL3P58872 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
RHBDL3P58872 AC091812.1-201ENST00000432235 1948 ntBASIC1.72□□□□□ -2.13
RHBDL3P58872 SNORD68-201ENST00000363214 84 ntBASIC1.72□□□□□ -2.13
RHBDL3P58872 Y_RNA.341-201ENST00000365341 102 ntBASIC1.72□□□□□ -2.13
RHBDL3P58872 AC117470.1-201ENST00000381974 330 ntBASIC1.72□□□□□ -2.13
RHBDL3P58872 Y_RNA.485-201ENST00000384395 102 ntBASIC1.72□□□□□ -2.13
RHBDL3P58872 RNU6-163P-201ENST00000384396 106 ntBASIC1.72□□□□□ -2.13
RHBDL3P58872 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.72□□□□□ -2.13
RHBDL3P58872 AC120024.3-201ENST00000603167 156 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 261.5 ms