Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Y_RNA.176-201ENST00000363815 109 ntBASIC1.59□□□□□ -2.15
CDH11P55287 RNU6-801P-201ENST00000364087 105 ntBASIC1.59□□□□□ -2.15
CDH11P55287 Y_RNA.456-201ENST00000384232 111 ntBASIC1.59□□□□□ -2.15
CDH11P55287 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CDH11P55287 HSPE1P9-201ENST00000440046 311 ntBASIC1.59□□□□□ -2.15
CDH11P55287 AC091021.1-201ENST00000468051 388 ntBASIC1.59□□□□□ -2.15
CDH11P55287 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.59□□□□□ -2.15
CDH11P55287 AC245060.5-201ENST00000610778 3293 ntBASIC1.58□□□□□ -2.16
CDH11P55287 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
CDH11P55287 Y_RNA.396-201ENST00000383949 103 ntBASIC1.58□□□□□ -2.16
CDH11P55287 Y_RNA.483-201ENST00000384380 101 ntBASIC1.58□□□□□ -2.16
CDH11P55287 MIR9-3-201ENST00000385084 90 ntBASIC1.58□□□□□ -2.16
CDH11P55287 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.58□□□□□ -2.16
CDH11P55287 MTND3P2-201ENST00000438452 342 ntBASIC1.58□□□□□ -2.16
CDH11P55287 RPL23AP6-201ENST00000446637 472 ntBASIC1.58□□□□□ -2.16
CDH11P55287 RNU7-94P-201ENST00000459576 63 ntBASIC1.58□□□□□ -2.16
CDH11P55287 TRBVB-201ENST00000477100 408 ntBASIC1.58□□□□□ -2.16
CDH11P55287 RNU2-31P-201ENST00000516954 155 ntBASIC1.58□□□□□ -2.16
CDH11P55287 RNU6-341P-201ENST00000516973 96 ntBASIC1.58□□□□□ -2.16
CDH11P55287 RNU6-570P-201ENST00000517051 105 ntBASIC1.58□□□□□ -2.16
CDH11P55287 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
CDH11P55287 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CDH11P55287 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CDH11P55287 RNU1-17P-201ENST00000363022 152 ntBASIC1.57□□□□□ -2.16
CDH11P55287 Y_RNA.149-201ENST00000363558 117 ntBASIC1.57□□□□□ -2.16
CDH11P55287 Y_RNA.341-201ENST00000365341 102 ntBASIC1.57□□□□□ -2.16
CDH11P55287 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
CDH11P55287 RNU6-376P-201ENST00000384731 106 ntBASIC1.57□□□□□ -2.16
CDH11P55287 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CDH11P55287 RNU6-360P-201ENST00000390944 104 ntBASIC1.57□□□□□ -2.16
CDH11P55287 RNU6-855P-201ENST00000410395 104 ntBASIC1.57□□□□□ -2.16
CDH11P55287 RPS4XP11-201ENST00000446897 772 ntBASIC1.57□□□□□ -2.16
CDH11P55287 SERF1AP1-201ENST00000514575 187 ntBASIC1.57□□□□□ -2.16
CDH11P55287 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
CDH11P55287 RNA5SP481-201ENST00000516814 122 ntBASIC1.57□□□□□ -2.16
CDH11P55287 AC136628.3-201ENST00000521868 290 ntBASIC1.57□□□□□ -2.16
CDH11P55287 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.57□□□□□ -2.16
CDH11P55287 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.57□□□□□ -2.16
CDH11P55287 MIR8054-201ENST00000620877 86 ntBASIC1.57□□□□□ -2.16
CDH11P55287 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CDH11P55287 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CDH11P55287 MIR335-201ENST00000362173 94 ntBASIC1.56□□□□□ -2.16
CDH11P55287 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
CDH11P55287 RNU6-1323P-201ENST00000384025 107 ntBASIC1.56□□□□□ -2.16
CDH11P55287 RNU6-136P-201ENST00000384663 107 ntBASIC1.56□□□□□ -2.16
CDH11P55287 RNU6-713P-201ENST00000384761 107 ntBASIC1.56□□□□□ -2.16
CDH11P55287 MIR520G-201ENST00000385064 90 ntBASIC1.56□□□□□ -2.16
CDH11P55287 RNU2-14P-201ENST00000411053 191 ntBASIC1.56□□□□□ -2.16
CDH11P55287 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH11P55287 AC245047.3-201ENST00000429428 127 ntBASIC1.56□□□□□ -2.16
CDH11P55287 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.56□□□□□ -2.16
CDH11P55287 RNA5SP57-201ENST00000459463 123 ntBASIC1.56□□□□□ -2.16
CDH11P55287 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.56□□□□□ -2.16
CDH11P55287 AC099513.1-201ENST00000490423 301 ntBASIC1.56□□□□□ -2.16
CDH11P55287 RPL21P9-201ENST00000556149 474 ntBASIC1.56□□□□□ -2.16
CDH11P55287 AC005972.2-201ENST00000604690 348 ntBASIC1.56□□□□□ -2.16
CDH11P55287 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH11P55287 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.56□□□□□ -2.16
CDH11P55287 AC100821.1-201ENST00000523153 2479 ntBASIC1.56□□□□□ -2.16
CDH11P55287 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CDH11P55287 UBE2WP1-201ENST00000362030 340 ntBASIC1.55□□□□□ -2.16
CDH11P55287 RNU6-661P-201ENST00000362409 107 ntBASIC1.55□□□□□ -2.16
CDH11P55287 Y_RNA.237-201ENST00000364439 102 ntBASIC1.55□□□□□ -2.16
CDH11P55287 RNU6-439P-201ENST00000384188 106 ntBASIC1.55□□□□□ -2.16
CDH11P55287 Y_RNA.461-201ENST00000384263 103 ntBASIC1.55□□□□□ -2.16
CDH11P55287 MIR194-1-201ENST00000384892 85 ntBASIC1.55□□□□□ -2.16
CDH11P55287 RNU6-440P-201ENST00000390882 105 ntBASIC1.55□□□□□ -2.16
CDH11P55287 SNORA26.5-201ENST00000391215 123 ntBASIC1.55□□□□□ -2.16
CDH11P55287 AL627390.1-201ENST00000396055 340 ntBASIC1.55□□□□□ -2.16
CDH11P55287 AL161935.2-201ENST00000414627 60 ntBASIC1.55□□□□□ -2.16
CDH11P55287 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH11P55287 AC024067.1-201ENST00000426199 223 ntBASIC1.55□□□□□ -2.16
CDH11P55287 RPS29P11-201ENST00000496507 171 ntBASIC1.55□□□□□ -2.16
CDH11P55287 RNU6-1096P-201ENST00000517089 102 ntBASIC1.55□□□□□ -2.16
CDH11P55287 DEFB108E-201ENST00000524692 240 ntBASIC1.55□□□□□ -2.16
CDH11P55287 AL358944.1-201ENST00000528537 144 ntBASIC1.55□□□□□ -2.16
CDH11P55287 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.55□□□□□ -2.16
CDH11P55287 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH11P55287 AL162730.1-201ENST00000605734 292 ntBASIC1.55□□□□□ -2.16
CDH11P55287 MIR8081-201ENST00000611533 95 ntBASIC1.55□□□□□ -2.16
CDH11P55287 AL078604.3-201ENST00000615580 211 ntBASIC1.55□□□□□ -2.16
CDH11P55287 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.55□□□□□ -2.16
CDH11P55287 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CDH11P55287 AC068700.1-201ENST00000565862 3754 ntBASIC1.54□□□□□ -2.16
CDH11P55287 SNORA1B-201ENST00000362535 133 ntBASIC1.54□□□□□ -2.16
CDH11P55287 Y_RNA.217-201ENST00000364214 105 ntBASIC1.54□□□□□ -2.16
CDH11P55287 RNA5SP190-201ENST00000365222 118 ntBASIC1.54□□□□□ -2.16
CDH11P55287 SNORA72.4-201ENST00000384174 132 ntBASIC1.54□□□□□ -2.16
CDH11P55287 SNORA53-201ENST00000391141 249 ntBASIC1.54□□□□□ -2.16
CDH11P55287 RNU11-5P-201ENST00000391216 129 ntBASIC1.54□□□□□ -2.16
CDH11P55287 RNU2-7P-201ENST00000410794 178 ntBASIC1.54□□□□□ -2.16
CDH11P55287 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.54□□□□□ -2.16
CDH11P55287 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.54□□□□□ -2.16
CDH11P55287 AC104332.1-201ENST00000440471 797 ntBASIC1.54□□□□□ -2.16
CDH11P55287 snoU13.27-201ENST00000459278 104 ntBASIC1.54□□□□□ -2.16
CDH11P55287 Y_RNA.641-201ENST00000459414 105 ntBASIC1.54□□□□□ -2.16
CDH11P55287 Y_RNA.637-201ENST00000459424 114 ntBASIC1.54□□□□□ -2.16
CDH11P55287 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.54□□□□□ -2.16
CDH11P55287 AC091959.1-201ENST00000495857 238 ntBASIC1.54□□□□□ -2.16
CDH11P55287 Y_RNA.668-201ENST00000516233 93 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms