Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.77□□□□□ -2.29
CDH4P55283 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.77□□□□□ -2.29
CDH4P55283 AC004467.1-201ENST00000615678 330 ntBASIC0.77□□□□□ -2.29
CDH4P55283 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CDH4P55283 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CDH4P55283 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
CDH4P55283 RNU6-1188P-201ENST00000363795 107 ntBASIC0.76□□□□□ -2.29
CDH4P55283 Y_RNA.248-201ENST00000364501 109 ntBASIC0.76□□□□□ -2.29
CDH4P55283 Y_RNA.355-201ENST00000365462 98 ntBASIC0.76□□□□□ -2.29
CDH4P55283 RNU6-1310P-201ENST00000384153 107 ntBASIC0.76□□□□□ -2.29
CDH4P55283 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
CDH4P55283 MIR526A1-201ENST00000384897 85 ntBASIC0.76□□□□□ -2.29
CDH4P55283 SNORA75.6-201ENST00000391318 127 ntBASIC0.76□□□□□ -2.29
CDH4P55283 RNU6-1156P-201ENST00000410365 100 ntBASIC0.76□□□□□ -2.29
CDH4P55283 RNU6-370P-201ENST00000411008 104 ntBASIC0.76□□□□□ -2.29
CDH4P55283 AC233266.1-201ENST00000454518 96 ntBASIC0.76□□□□□ -2.29
CDH4P55283 Y_RNA.635-201ENST00000459041 101 ntBASIC0.76□□□□□ -2.29
CDH4P55283 AC023442.1-201ENST00000531247 422 ntBASIC0.76□□□□□ -2.29
CDH4P55283 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.76□□□□□ -2.29
CDH4P55283 AC242852.1-201ENST00000612151 96 ntBASIC0.76□□□□□ -2.29
CDH4P55283 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.76□□□□□ -2.29
CDH4P55283 AC022306.2-201ENST00000617563 647 ntBASIC0.76□□□□□ -2.29
CDH4P55283 MIR6734-201ENST00000621166 68 ntBASIC0.76□□□□□ -2.29
CDH4P55283 AC244015.1-201ENST00000622301 99 ntBASIC0.76□□□□□ -2.29
CDH4P55283 TPTEP1-208ENST00000636884 213 ntBASIC0.76□□□□□ -2.29
CDH4P55283 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
CDH4P55283 Y_RNA.101-201ENST00000363154 102 ntBASIC0.75□□□□□ -2.29
CDH4P55283 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CDH4P55283 SNORA69.1-201ENST00000390904 137 ntBASIC0.75□□□□□ -2.29
CDH4P55283 AL354751.2-201ENST00000415471 210 ntBASIC0.75□□□□□ -2.29
CDH4P55283 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
CDH4P55283 MTND1P2-201ENST00000430604 821 ntBASIC0.75□□□□□ -2.29
CDH4P55283 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.75□□□□□ -2.29
CDH4P55283 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.75□□□□□ -2.29
CDH4P55283 ELOCP24-201ENST00000456370 334 ntBASIC0.75□□□□□ -2.29
CDH4P55283 snoU13.25-201ENST00000458945 104 ntBASIC0.75□□□□□ -2.29
CDH4P55283 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.75□□□□□ -2.29
CDH4P55283 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.75□□□□□ -2.29
CDH4P55283 AC092794.1-201ENST00000612734 582 ntBASIC0.75□□□□□ -2.29
CDH4P55283 RMST_2.1-201ENST00000617263 136 ntBASIC0.75□□□□□ -2.29
CDH4P55283 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
CDH4P55283 Y_RNA.118-201ENST00000363300 101 ntBASIC0.74□□□□□ -2.29
CDH4P55283 RNU6-833P-201ENST00000363486 107 ntBASIC0.74□□□□□ -2.29
CDH4P55283 RNU6-42P-201ENST00000384165 107 ntBASIC0.74□□□□□ -2.29
CDH4P55283 Y_RNA.474-201ENST00000384341 102 ntBASIC0.74□□□□□ -2.29
CDH4P55283 Y_RNA.599-201ENST00000410489 109 ntBASIC0.74□□□□□ -2.29
CDH4P55283 RNU6-1199P-201ENST00000411249 104 ntBASIC0.74□□□□□ -2.29
CDH4P55283 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.74□□□□□ -2.29
CDH4P55283 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.74□□□□□ -2.29
CDH4P55283 AL162725.1-201ENST00000435405 301 ntBASIC0.74□□□□□ -2.29
CDH4P55283 RPEP5-201ENST00000441137 268 ntBASIC0.74□□□□□ -2.29
CDH4P55283 RPS4XP11-201ENST00000446897 772 ntBASIC0.74□□□□□ -2.29
CDH4P55283 RNU7-90P-201ENST00000459216 62 ntBASIC0.74□□□□□ -2.29
CDH4P55283 RNU7-21P-201ENST00000459430 62 ntBASIC0.74□□□□□ -2.29
CDH4P55283 SNORD111.1-201ENST00000516421 86 ntBASIC0.74□□□□□ -2.29
CDH4P55283 RNU6-1337P-201ENST00000516525 95 ntBASIC0.74□□□□□ -2.29
CDH4P55283 AC136628.3-201ENST00000521868 290 ntBASIC0.74□□□□□ -2.29
CDH4P55283 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.74□□□□□ -2.29
CDH4P55283 RNY3P11-201ENST00000364153 102 ntBASIC0.73□□□□□ -2.29
CDH4P55283 RNU6-926P-201ENST00000384075 107 ntBASIC0.73□□□□□ -2.29
CDH4P55283 RNU6-890P-201ENST00000384121 107 ntBASIC0.73□□□□□ -2.29
CDH4P55283 SNORD116-13-201ENST00000384408 92 ntBASIC0.73□□□□□ -2.29
CDH4P55283 Y_RNA.505-201ENST00000384489 102 ntBASIC0.73□□□□□ -2.29
CDH4P55283 MIR625-201ENST00000385047 85 ntBASIC0.73□□□□□ -2.29
CDH4P55283 SNORA75.2-201ENST00000391138 150 ntBASIC0.73□□□□□ -2.29
CDH4P55283 SNORA75.3-201ENST00000391231 150 ntBASIC0.73□□□□□ -2.29
CDH4P55283 RNU6-876P-201ENST00000391295 104 ntBASIC0.73□□□□□ -2.29
CDH4P55283 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.73□□□□□ -2.29
CDH4P55283 Y_RNA.619-201ENST00000410951 90 ntBASIC0.73□□□□□ -2.29
CDH4P55283 RNU6-1304P-201ENST00000411374 106 ntBASIC0.73□□□□□ -2.29
CDH4P55283 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
CDH4P55283 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.73□□□□□ -2.29
CDH4P55283 RPL30P15-201ENST00000457129 321 ntBASIC0.73□□□□□ -2.29
CDH4P55283 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.73□□□□□ -2.29
CDH4P55283 RNU6-966P-201ENST00000516479 104 ntBASIC0.73□□□□□ -2.29
CDH4P55283 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
CDH4P55283 PRELID3BP2-201ENST00000605362 201 ntBASIC0.73□□□□□ -2.29
CDH4P55283 AC004832.4-201ENST00000608952 331 ntBASIC0.73□□□□□ -2.29
CDH4P55283 AL096861.1-201ENST00000610899 123 ntBASIC0.73□□□□□ -2.29
CDH4P55283 U6atac.1-201ENST00000616025 117 ntBASIC0.73□□□□□ -2.29
CDH4P55283 AC240442.1-201ENST00000616055 283 ntBASIC0.73□□□□□ -2.29
CDH4P55283 AL008636.1-201ENST00000625038 1018 ntBASIC0.73□□□□□ -2.29
CDH4P55283 Y_RNA.172-201ENST00000363765 102 ntBASIC0.72□□□□□ -2.29
CDH4P55283 Y_RNA.796-201ENST00000364268 102 ntBASIC0.72□□□□□ -2.29
CDH4P55283 Y_RNA.799-201ENST00000364992 102 ntBASIC0.72□□□□□ -2.29
CDH4P55283 RNY3P4-201ENST00000384428 101 ntBASIC0.72□□□□□ -2.29
CDH4P55283 MIR605-201ENST00000385078 83 ntBASIC0.72□□□□□ -2.29
CDH4P55283 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
CDH4P55283 AL031003.1-201ENST00000404229 172 ntBASIC0.72□□□□□ -2.29
CDH4P55283 RNU2-54P-201ENST00000410299 190 ntBASIC0.72□□□□□ -2.29
CDH4P55283 MRPS18CP6-201ENST00000423587 223 ntBASIC0.72□□□□□ -2.29
CDH4P55283 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.72□□□□□ -2.29
CDH4P55283 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.72□□□□□ -2.29
CDH4P55283 MTCO3P10-201ENST00000455912 772 ntBASIC0.72□□□□□ -2.29
CDH4P55283 AC245047.8-201ENST00000456455 284 ntBASIC0.72□□□□□ -2.29
CDH4P55283 snoU13.18-201ENST00000459483 104 ntBASIC0.72□□□□□ -2.29
CDH4P55283 SNORA25.10-201ENST00000515926 124 ntBASIC0.72□□□□□ -2.29
CDH4P55283 RNU6-470P-201ENST00000515954 104 ntBASIC0.72□□□□□ -2.29
CDH4P55283 AC120024.3-201ENST00000603167 156 ntBASIC0.72□□□□□ -2.29
CDH4P55283 AC138305.3-201ENST00000624988 240 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms