Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.44□□□□□ -1.7
ATN1P54259 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
ATN1P54259 MIR340-201ENST00000362125 95 ntBASIC4.44□□□□□ -1.7
ATN1P54259 SNORD115-31-201ENST00000365318 82 ntBASIC4.44□□□□□ -1.7
ATN1P54259 MIR520H-201ENST00000385126 88 ntBASIC4.44□□□□□ -1.7
ATN1P54259 SNORD77.2-201ENST00000391045 68 ntBASIC4.44□□□□□ -1.7
ATN1P54259 HDGFP1-201ENST00000405943 252 ntBASIC4.44□□□□□ -1.7
ATN1P54259 SNORA3.3-201ENST00000408712 125 ntBASIC4.44□□□□□ -1.7
ATN1P54259 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.44□□□□□ -1.7
ATN1P54259 RNU7-28P-201ENST00000516759 62 ntBASIC4.44□□□□□ -1.7
ATN1P54259 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
ATN1P54259 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.44□□□□□ -1.7
ATN1P54259 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC4.44□□□□□ -1.7
ATN1P54259 MIR3690-201ENST00000580266 75 ntBASIC4.44□□□□□ -1.7
ATN1P54259 AL512598.1-201ENST00000610158 273 ntBASIC4.44□□□□□ -1.7
ATN1P54259 NEAT1_2.1-201ENST00000620525 105 ntBASIC4.44□□□□□ -1.7
ATN1P54259 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATN1P54259 AL442644.1-201ENST00000454390 3105 ntBASIC4.44□□□□□ -1.7
ATN1P54259 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
ATN1P54259 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.44□□□□□ -1.7
ATN1P54259 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATN1P54259 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ATN1P54259 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.43□□□□□ -1.7
ATN1P54259 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ATN1P54259 RNA5SP97-201ENST00000365006 84 ntBASIC4.43□□□□□ -1.7
ATN1P54259 SNORA1.2-201ENST00000365189 134 ntBASIC4.43□□□□□ -1.7
ATN1P54259 RNU6-1279P-201ENST00000383917 103 ntBASIC4.43□□□□□ -1.7
ATN1P54259 SNORA8-201ENST00000384574 139 ntBASIC4.43□□□□□ -1.7
ATN1P54259 RNU2-63P-201ENST00000410792 194 ntBASIC4.43□□□□□ -1.7
ATN1P54259 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC4.43□□□□□ -1.7
ATN1P54259 Vault.1-201ENST00000516474 102 ntBASIC4.43□□□□□ -1.7
ATN1P54259 AC005000.2-201ENST00000605468 310 ntBASIC4.43□□□□□ -1.7
ATN1P54259 MIR432-201ENST00000606207 94 ntBASIC4.43□□□□□ -1.7
ATN1P54259 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
ATN1P54259 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATN1P54259 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
ATN1P54259 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
ATN1P54259 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATN1P54259 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATN1P54259 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATN1P54259 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.42□□□□□ -1.7
ATN1P54259 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATN1P54259 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATN1P54259 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.42□□□□□ -1.7
ATN1P54259 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATN1P54259 AC004552.1-201ENST00000419089 348 ntBASIC4.42□□□□□ -1.7
ATN1P54259 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.42□□□□□ -1.7
ATN1P54259 CYCSP35-201ENST00000451978 304 ntBASIC4.42□□□□□ -1.7
ATN1P54259 RPS26P3-201ENST00000470205 348 ntBASIC4.42□□□□□ -1.7
ATN1P54259 AC090543.2-201ENST00000483963 348 ntBASIC4.42□□□□□ -1.7
ATN1P54259 AC004057.1-201ENST00000485827 348 ntBASIC4.42□□□□□ -1.7
ATN1P54259 SNORA31.1-201ENST00000515993 133 ntBASIC4.42□□□□□ -1.7
ATN1P54259 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.42□□□□□ -1.7
ATN1P54259 SNORA31.5-201ENST00000516190 133 ntBASIC4.42□□□□□ -1.7
ATN1P54259 AC024995.1-201ENST00000523014 93 ntBASIC4.42□□□□□ -1.7
ATN1P54259 AL627230.6-201ENST00000611129 280 ntBASIC4.42□□□□□ -1.7
ATN1P54259 MIR7975-201ENST00000619350 68 ntBASIC4.42□□□□□ -1.7
ATN1P54259 MIR4727-201ENST00000622232 55 ntBASIC4.42□□□□□ -1.7
ATN1P54259 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.42□□□□□ -1.7
ATN1P54259 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATN1P54259 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.42□□□□□ -1.7
ATN1P54259 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATN1P54259 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATN1P54259 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATN1P54259 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
ATN1P54259 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.41□□□□□ -1.7
ATN1P54259 Y_RNA.98-201ENST00000363109 102 ntBASIC4.41□□□□□ -1.7
ATN1P54259 RNU6-546P-201ENST00000383991 107 ntBASIC4.41□□□□□ -1.7
ATN1P54259 MIR515-2-201ENST00000384883 83 ntBASIC4.41□□□□□ -1.7
ATN1P54259 MIR515-1-201ENST00000384884 83 ntBASIC4.41□□□□□ -1.7
ATN1P54259 SNORD96B-201ENST00000386148 79 ntBASIC4.41□□□□□ -1.7
ATN1P54259 RNU6-1321P-201ENST00000390905 107 ntBASIC4.41□□□□□ -1.7
ATN1P54259 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC4.41□□□□□ -1.7
ATN1P54259 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.41□□□□□ -1.7
ATN1P54259 AC079150.2-201ENST00000443733 78 ntBASIC4.41□□□□□ -1.7
ATN1P54259 RNU6-1041P-201ENST00000516254 102 ntBASIC4.41□□□□□ -1.7
ATN1P54259 RNU6-958P-201ENST00000516995 106 ntBASIC4.41□□□□□ -1.7
ATN1P54259 MIR8066-201ENST00000617280 78 ntBASIC4.41□□□□□ -1.7
ATN1P54259 AC140113.4-201ENST00000622087 222 ntBASIC4.41□□□□□ -1.7
ATN1P54259 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATN1P54259 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ATN1P54259 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ATN1P54259 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.41□□□□□ -1.7
ATN1P54259 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATN1P54259 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATN1P54259 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ATN1P54259 RNU6-602P-201ENST00000411155 105 ntBASIC4.4□□□□□ -1.71
ATN1P54259 BX510359.1-201ENST00000456973 237 ntBASIC4.4□□□□□ -1.71
ATN1P54259 RNU7-67P-201ENST00000459003 62 ntBASIC4.4□□□□□ -1.71
ATN1P54259 SNORD67.1-201ENST00000516618 108 ntBASIC4.4□□□□□ -1.71
ATN1P54259 AP000867.2-201ENST00000532468 320 ntBASIC4.4□□□□□ -1.71
ATN1P54259 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
ATN1P54259 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATN1P54259 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.4□□□□□ -1.71
ATN1P54259 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ATN1P54259 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATN1P54259 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
ATN1P54259 MIR93-201ENST00000385024 80 ntBASIC4.39□□□□□ -1.71
ATN1P54259 AC015922.2-201ENST00000435593 184 ntBASIC4.39□□□□□ -1.71
ATN1P54259 AC009969.1-201ENST00000438726 172 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms