Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLCN3P51790 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
CLCN3P51790 RNU6-457P-201ENST00000363999 107 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 Y_RNA.277-201ENST00000364754 102 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 RNU6-338P-201ENST00000383888 105 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 AC009310.1-201ENST00000414414 451 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 HMGN2P34-201ENST00000437647 269 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 SNORD65B-201ENST00000459126 73 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 RNVU1-2-201ENST00000516326 135 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 MIR514B-201ENST00000516774 80 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 AC024995.1-201ENST00000523014 93 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 AC006380.1-201ENST00000603598 186 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 AP000942.3-201ENST00000603702 160 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 AC090425.1-201ENST00000610007 140 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
CLCN3P51790 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
CLCN3P51790 AC131280.1-202ENST00000624067 4211 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 SNORA25.1-201ENST00000362326 128 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 RNU6-862P-201ENST00000362804 105 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 Y_RNA.122-201ENST00000363331 96 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 SNORD27-201ENST00000363981 72 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 RNU6-1019P-201ENST00000364424 107 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 SNORA20B-201ENST00000384220 132 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 Y_RNA.552-201ENST00000384665 112 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 RNU6-651P-201ENST00000411040 105 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.9□□□□□ -2.11
CLCN3P51790 AC108667.1-201ENST00000428618 249 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 AC069257.2-201ENST00000441819 155 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 AC010598.1-201ENST00000510378 103 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.9□□□□□ -2.11
CLCN3P51790 AL078604.3-201ENST00000615580 211 ntBASIC1.9□□□□□ -2.11
CLCN3P51790 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
CLCN3P51790 SNORA27.1-201ENST00000362604 124 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 Y_RNA.124-201ENST00000363339 93 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 RNU6-801P-201ENST00000364087 105 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 RNU1-96P-201ENST00000364163 162 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 Y_RNA.269-201ENST00000364685 89 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 Y_RNA.287-201ENST00000364853 94 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 Y_RNA.368-201ENST00000365547 113 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 MIR873-201ENST00000401120 77 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 RNU4-71P-201ENST00000516258 113 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 AL137100.2-201ENST00000555786 315 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.89□□□□□ -2.11
CLCN3P51790 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CLCN3P51790 Y_RNA.310-201ENST00000365063 113 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 RNY4P28-201ENST00000365281 93 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 RNU6-117P-201ENST00000365415 107 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 RNU2-40P-201ENST00000410833 196 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 RNA5SP100-201ENST00000410903 110 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 RNA5SP59-201ENST00000410922 110 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 RNU2-64P-201ENST00000411315 191 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
CLCN3P51790 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.88□□□□□ -2.11
CLCN3P51790 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.88□□□□□ -2.11
CLCN3P51790 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.88□□□□□ -2.11
CLCN3P51790 AC022254.1-201ENST00000567857 235 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
CLCN3P51790 AL162424.1-201ENST00000602325 221 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 AC037487.3-201ENST00000606668 112 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.88□□□□□ -2.11
CLCN3P51790 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.88□□□□□ -2.11
CLCN3P51790 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
CLCN3P51790 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.88□□□□□ -2.11
CLCN3P51790 AC068700.1-201ENST00000565862 3754 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 RNU6-1272P-201ENST00000362776 107 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 Y_RNA.117-201ENST00000363294 101 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 RNU6-200P-201ENST00000364743 107 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 RNU6-662P-201ENST00000384253 104 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 RNU6-1289P-201ENST00000384431 106 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 RPL23AP6-201ENST00000446637 472 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 HSPE1P13-201ENST00000451143 297 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 Y_RNA.637-201ENST00000459424 114 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 COX6CP14-201ENST00000469580 174 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 RPS26P55-201ENST00000471178 356 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.87□□□□□ -2.11
CLCN3P51790 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.87□□□□□ -2.11
CLCN3P51790 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLCN3P51790 AC136628.3-201ENST00000521868 290 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.87□□□□□ -2.11
CLCN3P51790 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.87□□□□□ -2.11
CLCN3P51790 AC130289.1-201ENST00000577321 73 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 MIR4299-201ENST00000577899 72 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 MIR5094-201ENST00000578766 85 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 MIR502-201ENST00000606349 86 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 AL008718.3-201ENST00000610217 321 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 CENPCP1-201ENST00000533085 2578 ntBASIC1.87□□□□□ -2.11
CLCN3P51790 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CLCN3P51790 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
CLCN3P51790 RNU6-112P-201ENST00000363599 104 ntBASIC1.86□□□□□ -2.11
CLCN3P51790 Y_RNA.172-201ENST00000363765 102 ntBASIC1.86□□□□□ -2.11
CLCN3P51790 RNU6-271P-201ENST00000363858 105 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms