Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.39□□□□□ -2.19
LIG4P49917 MIR4423-201ENST00000580922 80 ntBASIC1.39□□□□□ -2.19
LIG4P49917 7SK.8-201ENST00000612110 250 ntBASIC1.39□□□□□ -2.19
LIG4P49917 7SK.11-201ENST00000615477 250 ntBASIC1.39□□□□□ -2.19
LIG4P49917 7SK.13-201ENST00000622040 250 ntBASIC1.39□□□□□ -2.19
LIG4P49917 AL008636.1-201ENST00000625038 1018 ntBASIC1.39□□□□□ -2.19
LIG4P49917 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LIG4P49917 MIRLET7C-201ENST00000362160 84 ntBASIC1.38□□□□□ -2.19
LIG4P49917 Y_RNA.172-201ENST00000363765 102 ntBASIC1.38□□□□□ -2.19
LIG4P49917 Y_RNA.329-201ENST00000365209 107 ntBASIC1.38□□□□□ -2.19
LIG4P49917 Y_RNA.621-201ENST00000411065 96 ntBASIC1.38□□□□□ -2.19
LIG4P49917 MCFD2P1-201ENST00000417812 300 ntBASIC1.38□□□□□ -2.19
LIG4P49917 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.38□□□□□ -2.19
LIG4P49917 Z98949.2-201ENST00000440996 144 ntBASIC1.38□□□□□ -2.19
LIG4P49917 RPS29P29-201ENST00000456396 171 ntBASIC1.38□□□□□ -2.19
LIG4P49917 RNU6-922P-201ENST00000516753 99 ntBASIC1.38□□□□□ -2.19
LIG4P49917 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
LIG4P49917 AC004832.4-201ENST00000608952 331 ntBASIC1.38□□□□□ -2.19
LIG4P49917 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
LIG4P49917 AC007485.1-201ENST00000616755 206 ntBASIC1.38□□□□□ -2.19
LIG4P49917 Y_RNA.112-201ENST00000363250 102 ntBASIC1.37□□□□□ -2.19
LIG4P49917 RNU6-1080P-201ENST00000383982 107 ntBASIC1.37□□□□□ -2.19
LIG4P49917 Y_RNA.462-201ENST00000384268 102 ntBASIC1.37□□□□□ -2.19
LIG4P49917 Y_RNA.526-201ENST00000384572 110 ntBASIC1.37□□□□□ -2.19
LIG4P49917 AL390729.2-201ENST00000416137 156 ntBASIC1.37□□□□□ -2.19
LIG4P49917 AL160236.1-201ENST00000556317 195 ntBASIC1.37□□□□□ -2.19
LIG4P49917 AL513534.2-201ENST00000603836 250 ntBASIC1.37□□□□□ -2.19
LIG4P49917 MIR8065-201ENST00000620577 100 ntBASIC1.37□□□□□ -2.19
LIG4P49917 uc_338.22-201ENST00000622722 187 ntBASIC1.37□□□□□ -2.19
LIG4P49917 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.37□□□□□ -2.19
LIG4P49917 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LIG4P49917 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
LIG4P49917 Y_RNA.419-201ENST00000384041 102 ntBASIC1.36□□□□□ -2.19
LIG4P49917 Y_RNA.431-201ENST00000384086 102 ntBASIC1.36□□□□□ -2.19
LIG4P49917 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.36□□□□□ -2.19
LIG4P49917 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.36□□□□□ -2.19
LIG4P49917 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.36□□□□□ -2.19
LIG4P49917 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
LIG4P49917 MIR369-201ENST00000362155 70 ntBASIC1.35□□□□□ -2.19
LIG4P49917 Y_RNA.331-201ENST00000365267 102 ntBASIC1.35□□□□□ -2.19
LIG4P49917 Y_RNA.395-201ENST00000383945 109 ntBASIC1.35□□□□□ -2.19
LIG4P49917 Y_RNA.439-201ENST00000384119 94 ntBASIC1.35□□□□□ -2.19
LIG4P49917 Y_RNA.509-201ENST00000384506 99 ntBASIC1.35□□□□□ -2.19
LIG4P49917 MIR653-201ENST00000385279 96 ntBASIC1.35□□□□□ -2.19
LIG4P49917 AC092473.1-201ENST00000441098 221 ntBASIC1.35□□□□□ -2.19
LIG4P49917 DYNLT3P2-201ENST00000442517 295 ntBASIC1.35□□□□□ -2.19
LIG4P49917 U8.20-201ENST00000459445 131 ntBASIC1.35□□□□□ -2.19
LIG4P49917 AC093852.1-201ENST00000503587 266 ntBASIC1.35□□□□□ -2.19
LIG4P49917 RNU6-917P-201ENST00000516294 104 ntBASIC1.35□□□□□ -2.19
LIG4P49917 RNU6-165P-201ENST00000517170 99 ntBASIC1.35□□□□□ -2.19
LIG4P49917 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LIG4P49917 AC040926.1-201ENST00000530195 238 ntBASIC1.35□□□□□ -2.19
LIG4P49917 AC011604.1-201ENST00000545978 196 ntBASIC1.35□□□□□ -2.19
LIG4P49917 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.35□□□□□ -2.19
LIG4P49917 AL359821.1-201ENST00000605519 182 ntBASIC1.35□□□□□ -2.19
LIG4P49917 AC011373.1-201ENST00000607270 237 ntBASIC1.35□□□□□ -2.19
LIG4P49917 AC068647.2-201ENST00000637380 353 ntBASIC1.35□□□□□ -2.19
LIG4P49917 AC091812.1-201ENST00000432235 1948 ntBASIC1.34□□□□□ -2.19
LIG4P49917 SNORD68-201ENST00000363214 84 ntBASIC1.34□□□□□ -2.19
LIG4P49917 RNU4-50P-201ENST00000364361 141 ntBASIC1.34□□□□□ -2.19
LIG4P49917 Y_RNA.327-201ENST00000365201 102 ntBASIC1.34□□□□□ -2.19
LIG4P49917 RNU6-855P-201ENST00000410395 104 ntBASIC1.34□□□□□ -2.19
LIG4P49917 RNU6-710P-201ENST00000410424 105 ntBASIC1.34□□□□□ -2.19
LIG4P49917 RPS20P10-201ENST00000451209 253 ntBASIC1.34□□□□□ -2.19
LIG4P49917 RNU6-475P-201ENST00000516073 104 ntBASIC1.34□□□□□ -2.19
LIG4P49917 RNU7-110P-201ENST00000516891 62 ntBASIC1.34□□□□□ -2.19
LIG4P49917 Y_RNA.713-201ENST00000517013 96 ntBASIC1.34□□□□□ -2.19
LIG4P49917 RNU6-1116P-201ENST00000517269 99 ntBASIC1.34□□□□□ -2.19
LIG4P49917 AC090049.2-201ENST00000550377 109 ntBASIC1.34□□□□□ -2.19
LIG4P49917 AC005972.2-201ENST00000604690 348 ntBASIC1.34□□□□□ -2.19
LIG4P49917 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
LIG4P49917 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
LIG4P49917 SNORD81.1-201ENST00000363064 77 ntBASIC1.33□□□□□ -2.2
LIG4P49917 SNORD42.2-201ENST00000365570 69 ntBASIC1.33□□□□□ -2.2
LIG4P49917 SNORD14.1-201ENST00000365609 90 ntBASIC1.33□□□□□ -2.2
LIG4P49917 Y_RNA.471-201ENST00000384312 102 ntBASIC1.33□□□□□ -2.2
LIG4P49917 RNU6-937P-201ENST00000384325 106 ntBASIC1.33□□□□□ -2.2
LIG4P49917 RNU6-1105P-201ENST00000384774 107 ntBASIC1.33□□□□□ -2.2
LIG4P49917 MIR1302-11-201ENST00000408051 138 ntBASIC1.33□□□□□ -2.2
LIG4P49917 MIR1302-9-201ENST00000408365 138 ntBASIC1.33□□□□□ -2.2
LIG4P49917 MIR1302-10-201ENST00000408734 138 ntBASIC1.33□□□□□ -2.2
LIG4P49917 Y_RNA.639-201ENST00000458981 102 ntBASIC1.33□□□□□ -2.2
LIG4P49917 AC022616.4-201ENST00000522985 181 ntBASIC1.33□□□□□ -2.2
LIG4P49917 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
LIG4P49917 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
LIG4P49917 AC120024.3-201ENST00000603167 156 ntBASIC1.33□□□□□ -2.2
LIG4P49917 MIR1302-2-201ENST00000607096 138 ntBASIC1.33□□□□□ -2.2
LIG4P49917 AL050343.2-201ENST00000607338 280 ntBASIC1.33□□□□□ -2.2
LIG4P49917 GHRLOS.1-201ENST00000610995 70 ntBASIC1.33□□□□□ -2.2
LIG4P49917 AL591926.4-201ENST00000616895 298 ntBASIC1.33□□□□□ -2.2
LIG4P49917 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LIG4P49917 RNU5E-4P-201ENST00000364931 120 ntBASIC1.32□□□□□ -2.2
LIG4P49917 SNORA2.2-201ENST00000365473 135 ntBASIC1.32□□□□□ -2.2
LIG4P49917 Y_RNA.551-201ENST00000384661 102 ntBASIC1.32□□□□□ -2.2
LIG4P49917 SNORD41-201ENST00000386967 70 ntBASIC1.32□□□□□ -2.2
LIG4P49917 RNU6-308P-201ENST00000390957 107 ntBASIC1.32□□□□□ -2.2
LIG4P49917 MIR891A-201ENST00000401237 79 ntBASIC1.32□□□□□ -2.2
LIG4P49917 AL451046.2-201ENST00000403074 277 ntBASIC1.32□□□□□ -2.2
LIG4P49917 CYCTP-201ENST00000504253 315 ntBASIC1.32□□□□□ -2.2
LIG4P49917 SNORA25.10-201ENST00000515926 124 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms