Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 RNU6-116P-201ENST00000384042 109 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 RNU6-136P-201ENST00000384663 107 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.28□□□□□ -2.61
CLIP1P30622 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 AC123904.2-201ENST00000548059 300 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.28□□□□□ -2.61
CLIP1P30622 AC091965.4-201ENST00000607691 587 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.28□□□□□ -2.61
CLIP1P30622 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 RNU6-769P-201ENST00000384407 104 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.29□□□□□ -2.62
CLIP1P30622 BX276092.1-201ENST00000427368 251 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 AC108059.2-201ENST00000434626 151 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 AC114878.1-201ENST00000441166 358 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.29□□□□□ -2.62
CLIP1P30622 MTND1P5-201ENST00000517906 940 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 AC107934.1-201ENST00000522215 217 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.29□□□□□ -2.62
CLIP1P30622 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.29□□□□□ -2.62
CLIP1P30622 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.29□□□□□ -2.62
CLIP1P30622 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-1.29□□□□□ -2.62
CLIP1P30622 AL133255.1-201ENST00000606374 441 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 AC137590.2-201ENST00000619709 240 ntBASIC-1.29□□□□□ -2.62
CLIP1P30622 SNORD93-201ENST00000408813 74 ntBASIC-1.3□□□□□ -2.62
CLIP1P30622 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.3□□□□□ -2.62
CLIP1P30622 RPL7P42-201ENST00000481005 679 ntBASIC-1.3□□□□□ -2.62
CLIP1P30622 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.3□□□□□ -2.62
CLIP1P30622 RNA5SP20-201ENST00000515976 84 ntBASIC-1.3□□□□□ -2.62
CLIP1P30622 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 RNU6-407P-201ENST00000365280 104 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 SNORA20B-201ENST00000384220 132 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 RNU6-291P-201ENST00000384720 107 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 U8.17-201ENST00000391292 132 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 MIR320B2-201ENST00000408479 138 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 MTND4P3-201ENST00000417829 541 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.31□□□□□ -2.62
CLIP1P30622 MTCO2P27-201ENST00000420740 428 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.31□□□□□ -2.62
CLIP1P30622 AC018865.2-201ENST00000423631 129 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.31□□□□□ -2.62
CLIP1P30622 AC116353.2-201ENST00000505332 712 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 RNU6-86P-201ENST00000606534 107 ntBASIC-1.31□□□□□ -2.62
CLIP1P30622 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
CLIP1P30622 RNU6-721P-201ENST00000410155 105 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 MTND4P18-201ENST00000447010 465 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 RNU6-329P-201ENST00000459618 107 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 GMFBP1-201ENST00000467831 427 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 AF186996.7-201ENST00000492781 209 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 SNORD38.3-201ENST00000516599 73 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 MTND4P33-201ENST00000556706 766 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 MIR365A-201ENST00000362260 87 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 SNORD50B-201ENST00000364995 70 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 RNU6-61P-201ENST00000365528 109 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 MIR522-201ENST00000385071 87 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 AC018710.1-201ENST00000506509 158 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 SNORA25.13-201ENST00000516395 103 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.32□□□□□ -2.62
CLIP1P30622 RMST_3.1-201ENST00000611651 109 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 AC023510.2-201ENST00000622162 746 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 AC126544.2-201ENST00000625174 749 ntBASIC-1.32□□□□□ -2.62
CLIP1P30622 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.33□□□□□ -2.62
CLIP1P30622 MIR30D-201ENST00000362283 70 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 SNORD56.2-201ENST00000363242 71 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 RNU6-535P-201ENST00000384722 107 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 SNORD110-201ENST00000408189 75 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 MTCO3P38-201ENST00000468910 766 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.33□□□□□ -2.62
CLIP1P30622 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.33□□□□□ -2.62
CLIP1P30622 RNU6-685P-201ENST00000517088 95 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 RNU7-181P-201ENST00000517234 74 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 MIR3165-201ENST00000579874 75 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 MIR4280-201ENST00000582178 76 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 AC013437.2-201ENST00000639587 677 ntBASIC-1.33□□□□□ -2.62
CLIP1P30622 RNU6-727P-201ENST00000363592 107 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 SNORD56B-201ENST00000384713 71 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 snoU13.2-201ENST00000459201 104 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.34□□□□□ -2.62
CLIP1P30622 RPL39P5-202ENST00000512505 151 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 RNA5SP470-201ENST00000516463 106 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 MTND5P34-201ENST00000568888 325 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 MIR4324-201ENST00000584846 72 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 MIR6082-201ENST00000613604 109 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 AC019226.2-201ENST00000625973 424 ntBASIC-1.34□□□□□ -2.62
CLIP1P30622 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.34□□□□□ -2.62
CLIP1P30622 AC073869.9-201ENST00000641610 120 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms