Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 TRBVB-201ENST00000477100 408 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 RNA5SP227-201ENST00000516184 113 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 RN7SKP287-201ENST00000516546 266 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 AC112693.2-201ENST00000556538 232 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 AC090617.3-201ENST00000573670 475 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 MTATP6P24-201ENST00000576835 677 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 MIR548AO-201ENST00000579992 96 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 MIR548AR-201ENST00000582191 57 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 AC125232.2-201ENST00000592457 143 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 AC027449.1-201ENST00000608890 407 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.1□□□□□ -2.43
HLA-DMBP28068 SNORD45.3-201ENST00000363836 72 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 RNU6-454P-201ENST00000364292 107 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 SNORA69-201ENST00000383895 132 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 SNORD28B-201ENST00000390993 75 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 SNORD100-201ENST00000408573 76 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 RNU6-648P-201ENST00000410190 107 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 USP9YP16-201ENST00000430287 407 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 USP9YP23-201ENST00000455085 407 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 RNU7-56P-201ENST00000458744 62 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 AC083904.1-201ENST00000487828 231 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 AC010486.3-201ENST00000511602 785 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 SNORA25.18-201ENST00000607153 114 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 AC092954.2-201ENST00000609103 430 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 AL357075.2-201ENST00000614906 189 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 AL603755.1-201ENST00000619504 163 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 uc_338.16-201ENST00000621804 95 ntBASIC-0.11□□□□□ -2.43
HLA-DMBP28068 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 RNU6-700P-201ENST00000391043 107 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 USMG5P1-201ENST00000425964 177 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 EIF1P2-201ENST00000428233 350 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 MTATP6P13-201ENST00000438531 667 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 RPL23AP54-201ENST00000495129 419 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 SNORA25.10-201ENST00000515926 124 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 RNA5SP285-201ENST00000516619 119 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 RNU6-835P-201ENST00000516974 104 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 RNU6-89P-201ENST00000606519 100 ntBASIC-0.12□□□□□ -2.43
HLA-DMBP28068 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 RNU6-595P-201ENST00000363944 107 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 SNORD50B-201ENST00000364995 70 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 SNORA8.2-201ENST00000384372 139 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 MIR329-2-201ENST00000385029 84 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 RNU2-54P-201ENST00000410299 190 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.13□□□□□ -2.43
HLA-DMBP28068 RNU6-329P-201ENST00000459618 107 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.13□□□□□ -2.43
HLA-DMBP28068 AC018448.1-201ENST00000552843 316 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 MIR4676-201ENST00000583078 72 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 AC124303.1-201ENST00000605703 360 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 AL050303.3-201ENST00000613704 284 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 AC097520.1-201ENST00000624435 385 ntBASIC-0.13□□□□□ -2.43
HLA-DMBP28068 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.13□□□□□ -2.43
HLA-DMBP28068 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
HLA-DMBP28068 RNU6-596P-201ENST00000365395 98 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 RNU6V-201ENST00000384105 107 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.14□□□□□ -2.43
HLA-DMBP28068 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.14□□□□□ -2.43
HLA-DMBP28068 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.14□□□□□ -2.43
HLA-DMBP28068 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 AC022616.4-201ENST00000522985 181 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 MIR4771-2-201ENST00000577758 74 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 MIR4771-1-201ENST00000582617 74 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 AC073648.5-201ENST00000603502 305 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 AC019193.3-201ENST00000609144 554 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 MIR3674-201ENST00000636576 68 ntBASIC-0.14□□□□□ -2.43
HLA-DMBP28068 ZNF299P-201ENST00000406845 1804 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 SNORA75.6-201ENST00000391318 127 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 RN7SKP142-201ENST00000411236 328 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.15□□□□□ -2.43
HLA-DMBP28068 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.15□□□□□ -2.43
HLA-DMBP28068 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.15□□□□□ -2.43
HLA-DMBP28068 AC104408.1-201ENST00000605241 170 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 AC020891.4-201ENST00000605745 93 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 AC087752.4-201ENST00000605911 462 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 AC091931.1-201ENST00000623488 728 ntBASIC-0.15□□□□□ -2.43
HLA-DMBP28068 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 RNU4-55P-201ENST00000410731 137 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 MTATP6P19-201ENST00000413797 659 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 AC015818.7-201ENST00000428754 109 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms