| YY1 | P25490 | Y_RNA.401-201 | ENST00000383965 | 117 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | Y_RNA.569-201 | ENST00000384749 | 103 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | SNORA40.19-201 | ENST00000390846 | 128 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | SNORD23.1-201 | ENST00000408212 | 104 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | AL356379.1-201 | ENST00000414105 | 126 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | AL513185.1-201 | ENST00000431638 | 162 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | HMGN2P34-201 | ENST00000437647 | 269 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | AL135790.2-201 | ENST00000437701 | 267 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | AC245102.2-201 | ENST00000448956 | 180 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | MTND4LP30-201 | ENST00000454092 | 297 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | AC011406.1-201 | ENST00000512440 | 370 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | RNA5SP436-201 | ENST00000516020 | 115 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | RNU6-191P-201 | ENST00000516295 | 94 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | Y_RNA.680-201 | ENST00000516441 | 93 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | SNORA31.25-201 | ENST00000517242 | 134 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | RNU7-128P-201 | ENST00000517247 | 62 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | AC006380.1-201 | ENST00000603598 | 186 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | SNORD14A-201 | ENST00000606526 | 91 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | MIR338-201 | ENST00000636369 | 67 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| YY1 | P25490 | TBL1XR1-208 | ENST00000430069 | 7948 nt | APPRIS P1 TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.20-201 | ENST00000362479 | 113 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | RNU1-42P-201 | ENST00000364033 | 160 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | SNORA3A-201 | ENST00000364113 | 130 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.217-201 | ENST00000364214 | 105 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.350-201 | ENST00000365409 | 98 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.368-201 | ENST00000365547 | 113 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | RNU2-38P-201 | ENST00000410856 | 79 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.641-201 | ENST00000459414 | 105 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | SNHG14-219 | ENST00000553134 | 470 nt | TSL 2 BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | AL078604.3-201 | ENST00000615580 | 211 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | U2.14-201 | ENST00000615943 | 113 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | KCNQ1OT1_5.1-201 | ENST00000621902 | 226 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | U6.108-201 | ENST00000637764 | 58 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| YY1 | P25490 | snoU2-30.2-201 | ENST00000362805 | 70 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | RNU1-93P-201 | ENST00000364704 | 169 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.329-201 | ENST00000365209 | 107 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.352-201 | ENST00000365439 | 102 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | MIR518A2-201 | ENST00000384966 | 87 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | TRAJ48-201 | ENST00000390489 | 63 nt | APPRIS P1 BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.618-201 | ENST00000410949 | 107 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | POLR2KP2-201 | ENST00000438155 | 177 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | MRPS10P1-201 | ENST00000448483 | 130 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | AL354733.1-201 | ENST00000458016 | 476 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | RPS26P55-201 | ENST00000471178 | 356 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | RNU6-1023P-201 | ENST00000516137 | 106 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | DEFB108E-201 | ENST00000524692 | 240 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | AC087463.2-201 | ENST00000565943 | 472 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | MIR4282-201 | ENST00000583613 | 67 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | FAM106DP-201 | ENST00000586416 | 501 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | MALAT1-207 | ENST00000613376 | 132 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | U6.73-201 | ENST00000619194 | 103 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | uc_338.20-201 | ENST00000621563 | 178 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | AC006001.4-201 | ENST00000622243 | 395 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | PTPRQ-208 | ENST00000614701 | 8289 nt | APPRIS P1 TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.124-201 | ENST00000363339 | 93 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.307-201 | ENST00000365022 | 117 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.310-201 | ENST00000365063 | 113 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.447-201 | ENST00000384184 | 113 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| YY1 | P25490 | AC099677.2-201 | ENST00000436385 | 175 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| YY1 | P25490 | SNORD2.1-201 | ENST00000458762 | 69 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| YY1 | P25490 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.25 | □□□□□ -2.05 | | |
| YY1 | P25490 | MUC15-203 | ENST00000455601 | 3156 nt | APPRIS P1 TSL 2 BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.82-201 | ENST00000363000 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.92-201 | ENST00000363043 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | RNU6-271P-201 | ENST00000363858 | 105 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.235-201 | ENST00000364412 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.275-201 | ENST00000364726 | 110 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.306-201 | ENST00000365015 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.312-201 | ENST00000365089 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.322-201 | ENST00000365151 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.416-201 | ENST00000384014 | 113 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.478-201 | ENST00000384358 | 107 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | MIR17-201 | ENST00000385012 | 84 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | SNORA53-201 | ENST00000391141 | 249 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | RNA5SP465-201 | ENST00000391195 | 109 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | MIR548J-201 | ENST00000408833 | 112 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | RNA5SP338-201 | ENST00000410495 | 85 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.650-201 | ENST00000459002 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | RPL39P38-201 | ENST00000467018 | 153 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | RPS26P45-201 | ENST00000471748 | 340 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | AC103879.1-201 | ENST00000503093 | 255 nt | TSL 2 BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | SNORA27.4-201 | ENST00000516650 | 95 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.777-201 | ENST00000516982 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | MIR3126-201 | ENST00000577443 | 74 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | AC005786.1-201 | ENST00000588553 | 154 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.771-201 | ENST00000598668 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | DEFB117-201 | ENST00000602356 | 141 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | AL645939.4-201 | ENST00000604495 | 135 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | AL627230.5-201 | ENST00000619807 | 58 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.789-201 | ENST00000622480 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | NAA50-211 | ENST00000630058 | 177 nt | TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| YY1 | P25490 | TPTE2-204 | ENST00000400103 | 1652 nt | TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| YY1 | P25490 | RNU4-80P-201 | ENST00000363200 | 141 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| YY1 | P25490 | RNU1-22P-201 | ENST00000363334 | 158 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| YY1 | P25490 | Y_RNA.539-201 | ENST00000384635 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| YY1 | P25490 | MIR216A-201 | ENST00000385063 | 110 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| YY1 | P25490 | BX510359.4-201 | ENST00000423750 | 193 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| YY1 | P25490 | AC091959.1-201 | ENST00000495857 | 238 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| YY1 | P25490 | SNORA70.12-201 | ENST00000516084 | 153 nt | BASIC | 2.23 | □□□□□ -2.05 | | |