Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 UBBP3-201ENST00000445497 241 ntBASIC2.41□□□□□ -2.02
NR4A1P22736 RNA5SP82-201ENST00000516707 92 ntBASIC2.41□□□□□ -2.02
NR4A1P22736 AC011604.1-201ENST00000545978 196 ntBASIC2.41□□□□□ -2.02
NR4A1P22736 AC090049.2-201ENST00000550377 109 ntBASIC2.41□□□□□ -2.02
NR4A1P22736 RPL23AP91-201ENST00000569211 455 ntBASIC2.41□□□□□ -2.02
NR4A1P22736 Y_RNA.757-201ENST00000578934 114 ntBASIC2.41□□□□□ -2.02
NR4A1P22736 MIR4662B-201ENST00000579498 81 ntBASIC2.41□□□□□ -2.02
NR4A1P22736 U2.20-201ENST00000613956 192 ntBASIC2.41□□□□□ -2.02
NR4A1P22736 U6.73-201ENST00000619194 103 ntBASIC2.41□□□□□ -2.02
NR4A1P22736 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.41□□□□□ -2.02
NR4A1P22736 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.4□□□□□ -2.02
NR4A1P22736 RNU6-136P-201ENST00000384663 107 ntBASIC2.4□□□□□ -2.03
NR4A1P22736 MIR520G-201ENST00000385064 90 ntBASIC2.4□□□□□ -2.03
NR4A1P22736 RNU2-70P-201ENST00000410718 179 ntBASIC2.4□□□□□ -2.03
NR4A1P22736 SUMO1P4-201ENST00000429430 302 ntBASIC2.4□□□□□ -2.03
NR4A1P22736 Z96811.1-201ENST00000445880 108 ntBASIC2.4□□□□□ -2.03
NR4A1P22736 SNORD11-201ENST00000459124 84 ntBASIC2.4□□□□□ -2.03
NR4A1P22736 AC023141.11-201ENST00000508864 202 ntBASIC2.4□□□□□ -2.03
NR4A1P22736 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NR4A1P22736 Y_RNA.111-201ENST00000363248 100 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 RNU1-23P-201ENST00000363361 144 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 SNORA5B-201ENST00000363786 132 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 RNU6-743P-201ENST00000364151 106 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 RNU1-96P-201ENST00000364163 162 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 Y_RNA.796-201ENST00000364268 102 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 Y_RNA.799-201ENST00000364992 102 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 MIR562-201ENST00000384894 95 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 MIR561-201ENST00000385216 97 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 AL138827.1-201ENST00000402666 306 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 RNU2-48P-201ENST00000410694 191 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 AL035461.1-201ENST00000421490 332 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 EEF1B2P7-201ENST00000451177 676 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.39□□□□□ -2.03
NR4A1P22736 RN7SKP132-201ENST00000516001 208 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.39□□□□□ -2.03
NR4A1P22736 MIR4635-201ENST00000583759 79 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 MIR3117-201ENST00000584034 78 ntBASIC2.39□□□□□ -2.03
NR4A1P22736 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NR4A1P22736 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NR4A1P22736 Y_RNA.120-201ENST00000363304 110 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 RNU6-1209P-201ENST00000363655 107 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 RNY1P11-201ENST00000363759 113 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 Y_RNA.634-201ENST00000364811 113 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 RNU6-1325P-201ENST00000364905 105 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 RNU6-1138P-201ENST00000365359 106 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 RNU6-1056P-201ENST00000383996 107 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 MIR9-1-201ENST00000385198 89 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.38□□□□□ -2.03
NR4A1P22736 Y_RNA.692-201ENST00000516627 105 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 Y_RNA.712-201ENST00000517011 92 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.38□□□□□ -2.03
NR4A1P22736 MIR3616-201ENST00000584070 92 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.38□□□□□ -2.03
NR4A1P22736 JPX_2.1-201ENST00000614161 69 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 SCARNA15.3-201ENST00000626315 122 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 SCARNA4.1-201ENST00000628597 123 ntBASIC2.38□□□□□ -2.03
NR4A1P22736 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NR4A1P22736 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NR4A1P22736 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.37□□□□□ -2.03
NR4A1P22736 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NR4A1P22736 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NR4A1P22736 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NR4A1P22736 RNU1-112P-201ENST00000364401 164 ntBASIC2.37□□□□□ -2.03
NR4A1P22736 RNA5SP21-201ENST00000410917 96 ntBASIC2.37□□□□□ -2.03
NR4A1P22736 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
NR4A1P22736 OR9P1P-201ENST00000496431 281 ntBASIC2.37□□□□□ -2.03
NR4A1P22736 RNU6-991P-201ENST00000516168 107 ntBASIC2.37□□□□□ -2.03
NR4A1P22736 AC079600.2-201ENST00000550076 130 ntBASIC2.37□□□□□ -2.03
NR4A1P22736 AC131055.1-201ENST00000584626 316 ntBASIC2.37□□□□□ -2.03
NR4A1P22736 AC007229.1-201ENST00000590455 412 ntBASIC2.37□□□□□ -2.03
NR4A1P22736 AL355297.2-201ENST00000604792 129 ntBASIC2.37□□□□□ -2.03
NR4A1P22736 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NR4A1P22736 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.36□□□□□ -2.03
NR4A1P22736 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.36□□□□□ -2.03
NR4A1P22736 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NR4A1P22736 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NR4A1P22736 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.36□□□□□ -2.03
NR4A1P22736 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.36□□□□□ -2.03
NR4A1P22736 MIR340-201ENST00000362125 95 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 snoU2-30.2-201ENST00000362805 70 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 AC060773.1-201ENST00000421698 310 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 AC003685.2-201ENST00000422795 395 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 HMGN2P34-201ENST00000437647 269 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 AL353689.1-201ENST00000438895 199 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 RNA5SP356-201ENST00000515972 94 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 RNU7-99P-201ENST00000516271 62 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 RNU6-1096P-201ENST00000517089 102 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.36□□□□□ -2.03
NR4A1P22736 Pinc.1-201ENST00000616452 154 ntBASIC2.36□□□□□ -2.03
NR4A1P22736 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NR4A1P22736 AC138915.1-201ENST00000565427 1685 ntBASIC2.35□□□□□ -2.03
NR4A1P22736 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NR4A1P22736 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NR4A1P22736 SRIP3-201ENST00000413200 219 ntBASIC2.35□□□□□ -2.03
NR4A1P22736 AL513477.1-202ENST00000417061 214 ntBASIC2.35□□□□□ -2.03
NR4A1P22736 RPS12P2-201ENST00000439728 269 ntBASIC2.35□□□□□ -2.03
NR4A1P22736 AC011406.1-201ENST00000512440 370 ntBASIC2.35□□□□□ -2.03
NR4A1P22736 RNU7-149P-201ENST00000516739 59 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms