Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 SNORD56B-201ENST00000384713 71 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 MIR586-201ENST00000385035 97 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 RNU2-39P-201ENST00000410604 198 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.54□□□□□ -2.5
COL6A3P12111 AC008134.1-201ENST00000420943 193 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 RNU7-73P-201ENST00000458743 63 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 RNU6-221P-201ENST00000459541 99 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AL049829.1-201ENST00000465411 156 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 SNRPGP7-201ENST00000469016 106 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AC021451.1-201ENST00000523498 1129 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AC100814.1-201ENST00000606963 623 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AC022893.3-201ENST00000607665 437 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AC022306.2-201ENST00000617563 647 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AC010608.3-201ENST00000625048 527 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AL445523.1-201ENST00000451184 1362 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.54□□□□□ -2.5
COL6A3P12111 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
COL6A3P12111 MIR655-201ENST00000362159 97 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 MIR452-201ENST00000385020 85 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AC074085.1-201ENST00000413598 418 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AC004386.2-201ENST00000441858 148 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 RNU7-136P-201ENST00000458819 69 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.54□□□□□ -2.5
COL6A3P12111 AP000676.1-201ENST00000533307 52 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AL355375.2-201ENST00000574825 175 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 AP000942.4-201ENST00000604811 241 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 U6.73-201ENST00000619194 103 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 RNA5SP405-201ENST00000363059 114 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 SNORD38C-201ENST00000384381 69 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 RNY3P9-201ENST00000384727 106 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 SNORD28B-201ENST00000390993 75 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 MTCO1P57-201ENST00000432182 261 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 FCF1P4-201ENST00000448326 183 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC021146.6-201ENST00000514659 117 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 SNORD38.3-201ENST00000516599 73 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC140658.3-201ENST00000567603 271 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC087683.1-201ENST00000591187 441 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC231657.1-201ENST00000624313 397 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 MIR217-201ENST00000384817 110 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 U8.17-201ENST00000391292 132 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 RNU2-62P-201ENST00000410868 191 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.55□□□□□ -2.5
COL6A3P12111 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.55□□□□□ -2.5
COL6A3P12111 AC078809.1-201ENST00000427601 140 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.55□□□□□ -2.5
COL6A3P12111 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 SNORD18.2-201ENST00000459604 70 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.55□□□□□ -2.5
COL6A3P12111 AF186996.7-201ENST00000492781 209 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 RNU6-677P-201ENST00000516914 101 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.55□□□□□ -2.5
COL6A3P12111 AC068880.4-201ENST00000623082 495 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 MIR517B-201ENST00000385102 67 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC012306.1-201ENST00000423267 114 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.55□□□□□ -2.5
COL6A3P12111 AC244505.6-201ENST00000452829 130 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AL138752.1-201ENST00000452964 351 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.55□□□□□ -2.5
COL6A3P12111 RNA5SP106-201ENST00000517274 100 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 DEFB131E-202ENST00000602581 683 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 AC069431.2-201ENST00000604149 1099 ntBASIC-0.55□□□□□ -2.5
COL6A3P12111 SNORA27.3-201ENST00000364937 134 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
COL6A3P12111 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 MIR876-201ENST00000401147 81 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 AL117339.3-201ENST00000418733 162 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL6A3P12111 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.56□□□□□ -2.5
COL6A3P12111 AL360271.2-201ENST00000447710 161 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL6A3P12111 SUMO1P2-201ENST00000452524 304 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 MTCO3P38-201ENST00000468910 766 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL6A3P12111 AC119751.4-201ENST00000507498 357 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.56□□□□□ -2.5
COL6A3P12111 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL6A3P12111 AL353803.5-201ENST00000599815 141 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 AC112204.3-201ENST00000623822 332 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 AC073869.9-201ENST00000641610 120 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 MIR570-201ENST00000384917 97 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 ZNF114P1-201ENST00000453500 292 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 Y_RNA.657-201ENST00000515983 102 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 RNU6-583P-201ENST00000516012 92 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 RNU6-64P-201ENST00000517119 105 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL6A3P12111 ADI1P3-201ENST00000549509 470 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL6A3P12111 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms