Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL359634.1-202ENST00000404721 284 ntBASIC-1.06□□□□□ -2.58
APOBP04114 RNU7-74P-201ENST00000459104 62 ntBASIC-1.06□□□□□ -2.58
APOBP04114 DPPA3P3-201ENST00000603842 430 ntBASIC-1.06□□□□□ -2.58
APOBP04114 AL445435.1-201ENST00000604232 665 ntBASIC-1.06□□□□□ -2.58
APOBP04114 AC010608.3-201ENST00000625048 527 ntBASIC-1.06□□□□□ -2.58
APOBP04114 SNORA40.17-201ENST00000517256 115 ntBASIC-1.06□□□□□ -2.58
APOBP04114 AC087883.1-201ENST00000551882 391 ntBASIC-1.06□□□□□ -2.58
APOBP04114 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.06□□□□□ -2.58
APOBP04114 MIR4423-201ENST00000580922 80 ntBASIC-1.06□□□□□ -2.58
APOBP04114 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
APOBP04114 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.06□□□□□ -2.58
APOBP04114 SNORA31.3-201ENST00000516029 96 ntBASIC-1.06□□□□□ -2.58
APOBP04114 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.06□□□□□ -2.58
APOBP04114 MIR6740-201ENST00000618268 113 ntBASIC-1.06□□□□□ -2.58
APOBP04114 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.06□□□□□ -2.58
APOBP04114 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.06□□□□□ -2.58
APOBP04114 AL139421.1-201ENST00000423010 169 ntBASIC-1.06□□□□□ -2.58
APOBP04114 AC090517.1-201ENST00000569307 266 ntBASIC-1.06□□□□□ -2.58
APOBP04114 MIR516B2-201ENST00000385190 85 ntBASIC-1.07□□□□□ -2.58
APOBP04114 UQCRBP2-201ENST00000447827 297 ntBASIC-1.07□□□□□ -2.58
APOBP04114 RNU6-412P-201ENST00000516434 106 ntBASIC-1.07□□□□□ -2.58
APOBP04114 AL355375.2-201ENST00000574825 175 ntBASIC-1.07□□□□□ -2.58
APOBP04114 MIR4438-201ENST00000585271 93 ntBASIC-1.07□□□□□ -2.58
APOBP04114 SNORA2.1-201ENST00000363089 137 ntBASIC-1.07□□□□□ -2.58
APOBP04114 SNORD74.6-201ENST00000364796 70 ntBASIC-1.07□□□□□ -2.58
APOBP04114 MIR507-201ENST00000385234 94 ntBASIC-1.07□□□□□ -2.58
APOBP04114 RNU7-55P-201ENST00000459426 62 ntBASIC-1.07□□□□□ -2.58
APOBP04114 RNU6-221P-201ENST00000459541 99 ntBASIC-1.07□□□□□ -2.58
APOBP04114 RNU6-344P-201ENST00000516635 111 ntBASIC-1.07□□□□□ -2.58
APOBP04114 AC068587.5-201ENST00000528506 175 ntBASIC-1.07□□□□□ -2.58
APOBP04114 AC068587.4-201ENST00000533893 186 ntBASIC-1.07□□□□□ -2.58
APOBP04114 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.07□□□□□ -2.58
APOBP04114 RNU6-621P-201ENST00000364752 109 ntBASIC-1.07□□□□□ -2.58
APOBP04114 RPS29P24-201ENST00000486345 171 ntBASIC-1.07□□□□□ -2.58
APOBP04114 AF186996.7-201ENST00000492781 209 ntBASIC-1.07□□□□□ -2.58
APOBP04114 RNA5SP454-201ENST00000517231 127 ntBASIC-1.07□□□□□ -2.58
APOBP04114 AP000907.4-201ENST00000604143 237 ntBASIC-1.07□□□□□ -2.58
APOBP04114 U8.17-201ENST00000391292 132 ntBASIC-1.08□□□□□ -2.58
APOBP04114 RNU2-11P-201ENST00000459191 187 ntBASIC-1.08□□□□□ -2.58
APOBP04114 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.08□□□□□ -2.58
APOBP04114 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.08□□□□□ -2.58
APOBP04114 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.08□□□□□ -2.58
APOBP04114 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.08□□□□□ -2.58
APOBP04114 MIRLET7B-201ENST00000385140 83 ntBASIC-1.08□□□□□ -2.58
APOBP04114 AP000676.1-201ENST00000533307 52 ntBASIC-1.08□□□□□ -2.58
APOBP04114 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.08□□□□□ -2.58
APOBP04114 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.08□□□□□ -2.58
APOBP04114 SNORD28-201ENST00000384706 75 ntBASIC-1.08□□□□□ -2.58
APOBP04114 MIR4791-201ENST00000607666 84 ntBASIC-1.08□□□□□ -2.58
APOBP04114 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.08□□□□□ -2.58
APOBP04114 AC023510.2-201ENST00000622162 746 ntBASIC-1.08□□□□□ -2.58
APOBP04114 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
APOBP04114 RNU6-403P-201ENST00000363163 104 ntBASIC-1.08□□□□□ -2.58
APOBP04114 RNA5SP201-201ENST00000410316 124 ntBASIC-1.08□□□□□ -2.58
APOBP04114 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.08□□□□□ -2.58
APOBP04114 AC087894.1-201ENST00000538359 518 ntBASIC-1.08□□□□□ -2.58
APOBP04114 MIR544B-201ENST00000582372 78 ntBASIC-1.08□□□□□ -2.58
APOBP04114 AL138889.2-201ENST00000603883 242 ntBASIC-1.08□□□□□ -2.58
APOBP04114 AC144521.1-201ENST00000607148 956 ntBASIC-1.08□□□□□ -2.58
APOBP04114 MIR6854-201ENST00000614935 69 ntBASIC-1.08□□□□□ -2.58
APOBP04114 MIR4251-201ENST00000635819 61 ntBASIC-1.08□□□□□ -2.58
APOBP04114 MIRLET7C-201ENST00000362160 84 ntBASIC-1.09□□□□□ -2.58
APOBP04114 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.09□□□□□ -2.58
APOBP04114 RNU6-164P-201ENST00000364604 103 ntBASIC-1.09□□□□□ -2.58
APOBP04114 SNORD110-201ENST00000408189 75 ntBASIC-1.09□□□□□ -2.58
APOBP04114 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.09□□□□□ -2.58
APOBP04114 RPL39P6-201ENST00000448289 150 ntBASIC-1.09□□□□□ -2.58
APOBP04114 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.09□□□□□ -2.58
APOBP04114 SNORA25.13-201ENST00000516395 103 ntBASIC-1.09□□□□□ -2.58
APOBP04114 SNORA43.2-201ENST00000516652 128 ntBASIC-1.09□□□□□ -2.58
APOBP04114 SNORD11B-201ENST00000607707 90 ntBASIC-1.09□□□□□ -2.58
APOBP04114 RNU6-376P-201ENST00000384731 106 ntBASIC-1.09□□□□□ -2.58
APOBP04114 MIR16-1-201ENST00000385271 89 ntBASIC-1.09□□□□□ -2.58
APOBP04114 SNRPGP10-201ENST00000432323 225 ntBASIC-1.09□□□□□ -2.58
APOBP04114 MTCO3P38-201ENST00000468910 766 ntBASIC-1.09□□□□□ -2.58
APOBP04114 AC008628.2-201ENST00000502605 298 ntBASIC-1.09□□□□□ -2.58
APOBP04114 AC008608.1-201ENST00000603910 127 ntBASIC-1.09□□□□□ -2.58
APOBP04114 AL512506.1-201ENST00000613918 449 ntBASIC-1.09□□□□□ -2.58
APOBP04114 SNORD115-28-201ENST00000363931 81 ntBASIC-1.09□□□□□ -2.58
APOBP04114 MIR518F-201ENST00000384973 87 ntBASIC-1.09□□□□□ -2.58
APOBP04114 MTATP6P17-201ENST00000431030 672 ntBASIC-1.09□□□□□ -2.58
APOBP04114 RPL7P42-201ENST00000481005 679 ntBASIC-1.09□□□□□ -2.58
APOBP04114 SNORA25.17-201ENST00000517184 124 ntBASIC-1.09□□□□□ -2.58
APOBP04114 MIR548AR-201ENST00000582191 57 ntBASIC-1.09□□□□□ -2.58
APOBP04114 RNU6-137P-201ENST00000363680 108 ntBASIC-1.1□□□□□ -2.58
APOBP04114 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.1□□□□□ -2.58
APOBP04114 SNORD114-17-201ENST00000364699 75 ntBASIC-1.1□□□□□ -2.58
APOBP04114 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.1□□□□□ -2.58
APOBP04114 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.1□□□□□ -2.58
APOBP04114 AC012306.1-201ENST00000423267 114 ntBASIC-1.1□□□□□ -2.58
APOBP04114 RNU6-410P-201ENST00000517006 107 ntBASIC-1.1□□□□□ -2.58
APOBP04114 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.1□□□□□ -2.58
APOBP04114 AC010332.2-201ENST00000613083 1904 ntBASIC-1.1□□□□□ -2.58
APOBP04114 RNY1P11-201ENST00000363759 113 ntBASIC-1.1□□□□□ -2.59
APOBP04114 RNU6-77P-201ENST00000410554 91 ntBASIC-1.1□□□□□ -2.59
APOBP04114 AL353572.1-201ENST00000442490 417 ntBASIC-1.1□□□□□ -2.59
APOBP04114 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.1□□□□□ -2.59
APOBP04114 MIR3684-201ENST00000579779 74 ntBASIC-1.1□□□□□ -2.59
APOBP04114 AC091178.2-201ENST00000584401 117 ntBASIC-1.1□□□□□ -2.59
APOBP04114 RNU1-29P-201ENST00000606574 126 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms